RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 ATP5C1P36542 298 aaKnown RBP15.83■□□□□ 0.13
COL17A1-202ENST00000369733 LYPLAL1Q5VWZ2 237 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 EPGNQ6UW88 154 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 NIFKQ9BYG3 293 aaKnown RBP15.83■□□□□ 0.13
COL17A1-202ENST00000369733 FZD10Q9ULW2 581 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 NR2E3Q9Y5X4 410 aa15.83■□□□□ 0.13
COL17A1-202ENST00000369733 KPNA6O60684 536 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 HOXD13P35453 343 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 PRKAG1P54619 331 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 ACOX1Q15067 660 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 PCBP1Q15365 356 aaKnown RBP eCLIP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 BICRALQ6AI39 1079 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 ERICH5Q6P6B1 374 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 OR10A6Q8NH74 314 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 MBD2Q9UBB5 411 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 PKMP14618 531 aaKnown RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 RPL3P39023 403 aaKnown RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 ANKRD23Q86SG2 305 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 CMASQ8NFW8 434 aaPredicted RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 DQX1Q8TE96 717 aaKnown RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 GPR21Q99679 349 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 AGO1Q9UL18 857 aaKnown RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 SNX7Q9UNH6 387 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 TBX1O43435 398 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 MT-CYBP00156 380 aaPredicted RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 ATXN1P54253 815 aaKnown RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 SLC35G1Q2M3R5 365 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 SPRED3Q2MJR0 410 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 DEF8Q6ZN54 512 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 TCAIMQ8N3R3 496 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 TTC29Q8NA56 475 aaPredicted RBP15.83■□□□□ 0.12
COL17A1-202ENST00000369733 SUN5Q8TC36 379 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 C1GALT1C1Q96EU7 318 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 ABCB9Q9NP78 766 aa15.83■□□□□ 0.12
COL17A1-202ENST00000369733 H0Y858 1186 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 CCL22O00626 93 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 LGALS3BPQ08380 585 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 FAM182AQ5T1J6 154 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 DIRAS2Q96HU8 199 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 QRFPRQ96P65 431 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 NTPCRQ9BSD7 190 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 XRN1Q8IZH2 1706 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 J3QRK9 145 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 UBXN8O00124 270 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 MSI1O43347 362 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 C9P02748 559 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 CTPS1P17812 591 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 AZGP1P25311 298 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 WEE1P30291 646 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 GLUD2P49448 558 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 MBLAC2Q68D91 279 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 ZC3H3Q8IXZ2 948 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 TOP1MTQ969P6 601 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 C12orf43Q96C57 262 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 FBXL8Q96CD0 374 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 TBATAQ96M53 351 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 CCDC59Q9P031 241 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 KLHL33A6NCF5 533 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 AP2A2O94973 939 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 GNAZP19086 355 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 NTSP30990 170 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 KLF1Q13351 362 aaPredicted RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 RBM48Q5RL73 367 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 TREML1Q86YW5 311 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 OR4K2Q8NGD2 314 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 FAXDC2Q96IV6 333 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 FNDC11Q9BVV2 318 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 DNAJB9Q9UBS3 223 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 ALDH1A2O94788 518 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 HPGDP15428 266 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 MYL9P24844 172 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 L1CAMP32004 1257 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 SLC1A2P43004 574 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 TUBA4AP68366 448 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 SCN1BQ07699 218 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 FAM151BQ6UXP7 276 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 RBFAQ8N0V3 343 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 YTHDF1Q9BYJ9 559 aaKnown RBP15.82■□□□□ 0.12
COL17A1-202ENST00000369733 DPEP3Q9H4B8 488 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 ENTPD4Q9Y227 616 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 DUOX1Q9NRD9 1551 aa15.82■□□□□ 0.12
COL17A1-202ENST00000369733 CXCR6O00574 342 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 SMIM10L2AP0DMW4 78 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 SMIM10L2BP0DMW5 78 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 ICAM3P32942 547 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 KIR3DL1P43629 444 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 DAG1Q14118 895 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 OR52L1Q8NGH7 329 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 PIK3R3Q92569 461 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 APOLD1Q96LR9 279 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 TM6SF2Q9BZW4 377 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 UBE2QL1A1L167 161 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 TNFRSF11BO00300 401 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 PGLSO95336 258 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 FYNP06241 537 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 PSMA1P25786 263 aaKnown RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 MTPNP58546 118 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 POLR2LP62875 67 aaKnown RBP15.81■□□□□ 0.12
COL17A1-202ENST00000369733 IL18Q14116 193 aa15.81■□□□□ 0.12
COL17A1-202ENST00000369733 DPYSL2Q16555 572 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms