RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 KLHL5Q96PQ7 755 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 ZNF385DQ9H6B1 395 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 UCKL1Q9NWZ5 548 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 MIOSQ9NXC5 875 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 GABRDO14764 452 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 PAGE1O75459 146 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 IPO13O94829 963 aaKnown RBP15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 LRPAP1P30533 357 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 AIF1P55008 147 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 AQP6Q13520 282 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 ZNF846Q147U1 533 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 GPR158Q5T848 1215 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 AGAP9Q5VTM2 703 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 TRAF7Q6Q0C0 670 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 BEND7Q8N7W2 519 aaPredicted RBP15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 ZNF420Q8TAQ5 688 aaPredicted RBP15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 NPLOC4Q8TAT6 608 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 ANKRD49Q8WVL7 239 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 SMARCD1Q96GM5 515 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 NT5MQ9NPB1 228 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 RAD54BQ9Y620 910 aa15.9■□□□□ 0.14
SYNCRIP-202ENST00000369622 NR5A2O00482 541 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 NADKO95544 446 aaPredicted RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 POMCP01189 267 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 THP07101 528 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 SNRPB2P08579 225 aaKnown RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 BRCC3P46736 316 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 LHX1P48742 406 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 WNT3AP56704 352 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 CDC42EP1Q00587 391 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 ZIK1Q3SY52 487 aaPredicted RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 PIM3Q86V86 326 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 LRCH3Q96II8 777 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 ZNF641Q96N77 438 aaPredicted RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 UNC93B1Q9H1C4 597 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 EML4Q9HC35 981 aaKnown RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 MAGEE1Q9HCI5 957 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 SPAG4Q9NPE6 437 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 SATB2Q9UPW6 733 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 MICAL3Q7RTP6 2002 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 AXIN1O15169 862 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 CLASP2O75122 1294 aaKnown RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 KPNA2P52292 529 aaKnown RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 GEMP55040 296 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 POLD3Q15054 466 aaPredicted RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 INTS6LQ5JSJ4 861 aaKnown RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 DDIASQ8IXT1 998 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 CANT1Q8WVQ1 401 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 TMEM209Q96SK2 561 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 TDRD1Q9BXT4 1180 aaKnown RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 C12orf4Q9NQ89 552 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 CCL15-CCL14A0A0B4J2E2 113 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 H0Y858 1186 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 ZNF701M0R085 212 aaPredicted RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 PPP6CO00743 305 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 PSMD3O43242 534 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 AXLP30530 894 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 CASP2P42575 452 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 STX1BP61266 288 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 HERC3Q15034 1050 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 CCL15Q16663 113 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 TMEM236Q5W0B7 351 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 PLEKHG7Q6ZR37 379 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 SPATC1Q76KD6 591 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 TLK2Q86UE8 772 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 SLCO6A1Q86UG4 719 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 HMGCLL1Q8TB92 370 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 MED30Q96HR3 178 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 DOK1Q99704 481 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 LHPPQ9H008 270 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 HMG20AQ9NP66 347 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 PLSCR3Q9NRY6 295 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 B3GNT3Q9Y2A9 372 aa15.89■□□□□ 0.13
SYNCRIP-202ENST00000369622 ARHGAP33O14559 1287 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 NRP2O60462 931 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 NPHS1O60500 1241 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 SYNCRIPO60506 623 aaKnown RBP15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 MAFKO60675 156 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 SRP72O76094 671 aaKnown RBP15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 CCNCP24863 283 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 PGFP49763 221 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 CAPRIN1Q14444 709 aaKnown RBP15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 TIGD5Q53EQ6 642 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 SCN4BQ8IWT1 228 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 ESX1Q8N693 406 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 FCRL5Q96RD9 977 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 EMILIN2Q9BXX0 1053 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 B3GNT4Q9C0J1 378 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 IGSF5Q9NSI5 407 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 MTRRQ9UBK8 725 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 SLCO3A1Q9UIG8 710 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 VPS28Q9UK41 221 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 PSME2Q9UL46 239 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 V9GYQ6 96 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 TTC3P53804 2025 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 NUAK1O60285 661 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 SIX3O95343 332 aaPredicted RBP15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 CAPN1P07384 714 aa15.88■□□□□ 0.13
SYNCRIP-202ENST00000369622 LTA4HP09960 611 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms