RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 CACNA2D2Q9NY47 1150 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 PLK2Q9NYY3 685 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 KLHL3Q9UH77 587 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ENOPH1Q9UHY7 261 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ZBTB11O95625 1053 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 CAPN1P07384 714 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 POLR2EP19388 210 aaKnown RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 EDNRBP24530 442 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 HERVK_113P63132 956 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 ABRQ12979 859 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 SFT2D3Q587I9 215 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 RGMBQ6NW40 437 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 ZNF467Q7Z7K2 595 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 ATL1Q8WXF7 558 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 SMAD5Q99717 465 aaKnown RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 ERVK-6Q9BXR3 956 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 TMEM245Q9H330 911 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 CNOT6Q9ULM6 557 aaKnown RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 ARIH1Q9Y4X5 557 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 AHDC1Q5TGY3 1603 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 PIRO00625 290 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 TBX18O95935 607 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 CKMT2P17540 419 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 CXCR3P49682 368 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 CACNG1Q06432 222 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 CCL14Q16627 93 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 RFX4Q33E94 735 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 TYW3Q6IPR3 259 aaKnown RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 UBE2R2Q712K3 238 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 PHACTR4Q8IZ21 702 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 ZNF558Q96NG5 402 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 FCRL3Q96P31 734 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 SLC39A3Q9BRY0 314 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 TIMMDC1Q9NPL8 285 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 PTTG2Q9NZH5 202 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 FAM72CH0Y354 149 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 DNAJA2O60884 412 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 SLC7A1P30825 629 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 PAGE2BQ5JRK9 111 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 DOK6Q6PKX4 331 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 SAPCD2Q86UD0 394 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 PDSS2Q86YH6 399 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 BRI3BPQ8WY22 251 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 B3GALT6Q96L58 329 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 APOLD1Q96LR9 279 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 CRTAC1Q9NQ79 661 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 ATAD3AQ9NVI7 634 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 EVLQ9UI08 416 aaPredicted RBP11.61□□□□□ -0.55
COPA-202ENST00000368069 IKZF3Q9UKT9 509 aa11.61□□□□□ -0.55
COPA-202ENST00000368069 TRAV19A0A0A6YYK7 116 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 IGKV6-21A0A0C4DH24 114 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 GLYATL1P3A0A0U1RQE8 302 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 E7ENX8 843 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 MATN2O00339 956 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 UMPSP11172 480 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 RFX3P48380 749 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 CDH4P55283 916 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 SMARCB1Q12824 385 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ARMC4Q5T2S8 1044 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 INTS11Q5TA45 600 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 GIPC3Q8TF64 312 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 MTIF3Q9H2K0 278 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 MFSD1Q9H3U5 465 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 MKS1Q9NXB0 559 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 MOCS1Q9NZB8 636 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 GTF2IRD1Q9UHL9 959 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 KPNA5O15131 536 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 THRBP10828 461 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ELNP15502 786 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ITPKAP23677 461 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 TRAP1Q12931 704 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 CGB2Q6NT52 195 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 RPS27LQ71UM5 84 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 PROX1Q92786 737 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 PKP2Q99959 881 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 TDRD1Q9BXT4 1180 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 REXO4Q9GZR2 422 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 AKTIPQ9H8T0 292 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 TLR6Q9Y2C9 796 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 J3KR12 359 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 PRAMEF1O95521 474 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ZBTB48P10074 688 aaPredicted RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 GTF2H2Q13888 395 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ZNF792Q3KQV3 632 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 SPANXN2Q5MJ10 180 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 GTF2H2CQ6P1K8 395 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 THAP5Q7Z6K1 395 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 PIM3Q86V86 326 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 HEATR4Q86WZ0 1026 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
COPA-202ENST00000368069 ZBTB2Q8N680 514 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 FEM1CQ96JP0 617 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 KIFC1Q9BW19 673 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 BRD9Q9H8M2 597 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 ZBTB26Q9HCK0 441 aa11.6□□□□□ -0.55
COPA-202ENST00000368069 MYH4Q9Y623 1939 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms