RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 P3H1Q32P28 736 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 ZNF569Q5MCW4 686 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 PERM1Q5SV97 790 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 CDCP2Q5VXM1 449 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 ALS2CLQ60I27 953 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 KCTD11Q693B1 232 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 DENND5AQ6IQ26 1287 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 CHST15Q7LFX5 561 aaPredicted RBP9.76□□□□□ -0.85
CD48-202ENST00000368046 TRIM74Q86UV6 250 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 C17orf82Q86X59 251 aaPredicted RBP9.76□□□□□ -0.85
CD48-202ENST00000368046 MARCH9Q86YJ5 346 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 GALNT13Q8IUC8 556 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 REXO1L1PQ8IX06 675 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 DCBLD1Q8N8Z6 715 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 ATG4AQ8WYN0 398 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 GLYATL1Q969I3 302 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 RTP4Q96DX8 246 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 VPS35Q96QK1 796 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 C19orf43Q9BQ61 176 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 APOL2Q9BQE5 337 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 SUDS3Q9H7L9 328 aaPredicted RBP9.76□□□□□ -0.85
CD48-202ENST00000368046 TAAR2Q9P1P5 351 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 SIRPGQ9P1W8 387 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 LRIT1Q9P2V4 623 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 ATXN10Q9UBB4 475 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 FEZ2Q9UHY8 353 aaPredicted RBP9.76□□□□□ -0.85
CD48-202ENST00000368046 APPL1Q9UKG1 709 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 ZKSCAN5Q9Y2L8 839 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 PKP3Q9Y446 797 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 PLEKHM1Q9Y4G2 1056 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 ST14Q9Y5Y6 855 aa9.76□□□□□ -0.85
CD48-202ENST00000368046 OAS3Q9Y6K5 1087 aaKnown RBP9.76□□□□□ -0.85
CD48-202ENST00000368046 CHUKO15111 745 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 GRID2O43424 1007 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 BUD23O43709 281 aaKnown RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 NUDT21O43809 227 aaKnown RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 VEGFDO43915 354 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 CEP104O60308 925 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A9O60656 530 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 USP12O75317 370 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 CDK14O94921 469 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 FGGP02679 453 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 SLC4A1P02730 911 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ZNF8P17098 575 aaPredicted RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A6P19224 532 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A1P22309 533 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A4P22310 534 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A3P35503 534 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A5P35504 534 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ACTN2P35609 894 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 SPAM1P38567 509 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ACTR1BP42025 376 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 CLDN6P56747 220 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ACTR1AP61163 376 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 TMEM115Q12893 351 aaPredicted RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 SNX1Q13596 522 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 SPARCL1Q14515 664 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 HLTFQ14527 1009 aaKnown RBP eCLIP9.75□□□□□ -0.85
CD48-202ENST00000368046 SIX1Q15475 284 aaPredicted RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 ATP13A5Q4VNC0 1218 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 C14orf28Q4W4Y0 310 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 DRICH1Q6PGQ1 229 aaPredicted RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 ADGRG6Q86SQ4 1221 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 LINC00523Q86TU6 105 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 PHYKPLQ8IUZ5 450 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ARL14Q8N4G2 192 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 KYQ8NBH2 561 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ZNF398Q8TD17 642 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 ZDHHC1Q8WTX9 485 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 GRAMD1AQ96CP6 724 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 PDLIM2Q96JY6 352 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 TTC25Q96NG3 672 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 OR2M4Q96R27 311 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 TBL1YQ9BQ87 522 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 CCDC3Q9BQI4 270 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 NRSN2Q9GZP1 204 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 OR2AG1Q9H205 316 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 LRRC40Q9H9A6 602 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A7Q9HAW7 530 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A10Q9HAW8 530 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 UGT1A8Q9HAW9 530 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 NPDC1Q9NQX5 325 aaPredicted RBP9.75□□□□□ -0.85
CD48-202ENST00000368046 HOMER3Q9NSC5 361 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 CEP295Q9C0D2 2601 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 LRRK1Q38SD2 2015 aa9.75□□□□□ -0.85
CD48-202ENST00000368046 GLYATL1P3A0A0U1RQE8 302 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ERI2A8K979 691 aaKnown RBP9.74□□□□□ -0.85
CD48-202ENST00000368046 B4DGG1 531 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ZW10O43264 779 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 TCEA3O75764 348 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ECEL1O95672 775 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 AP2A1O95782 977 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 IFNB1P01574 187 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 CXCR5P32302 372 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 FDFT1P37268 417 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 HADHAP40939 763 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 CLCNKAP51800 687 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 OLIG2Q13516 323 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 ITGA9Q13797 1035 aa9.74□□□□□ -0.85
CD48-202ENST00000368046 PTPRCAPQ14761 206 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms