RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 TGM7Q96PF1 710 aa8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 SMAD5Q99717 465 aaKnown RBP8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 LRRC19Q9H756 370 aa8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 UBA2Q9UBT2 640 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 CD84Q9UIB8 345 aa8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 OSGIN2Q9Y236 505 aa8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 KCNK6Q9Y257 313 aa8.39□□□□□ -1.07
HMGB1P39-201ENST00000366304 GOLGA6CA6NDK9 693 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 GOLGA6BA6NDN3 693 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 NPIPB15A6NHN6 443 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 F5H423 210 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 MASP2O00187 686 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 PRAMEF11O60813 436 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 DNAJC6O75061 913 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 SNRPB2P08579 225 aaKnown RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 GOLGA6DP0CG33 693 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 FOLR1P15328 257 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 LPOP22079 712 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 SERPINA4P29622 427 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 KRT9P35527 623 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CSNK1DP48730 415 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 EPHA4P54764 986 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 MARSP56192 900 aaKnown RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CETN1Q12798 172 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 IL11RAQ14626 422 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 ANO6Q4KMQ2 910 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CFAP58Q5T655 872 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 TMCO4Q5TGY1 634 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 ATL3Q6DD88 541 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 RAET1GQ6H3X3 334 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 TREML4Q6UXN2 200 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 TECPR1Q7Z6L1 1165 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 SYVN1Q86TM6 617 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CUZD1Q86UP6 607 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 PLXDC1Q8IUK5 500 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 RHOT1Q8IXI2 618 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 IQCKQ8N0W5 287 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 MMP21Q8N119 569 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 UMODL1-AS1Q8N2C9 162 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 RXFP2Q8WXD0 754 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CENPIQ92674 756 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 RSC1A1Q92681 617 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 SCAMP4Q969E2 229 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CELF6Q96J87 481 aaKnown RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 TRIM8Q9BZR9 551 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 ABCG8Q9H221 673 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 RETREG1Q9H6L5 497 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 ATP13A3Q9H7F0 1226 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 ZBTB20Q9HC78 741 aaPredicted RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 METTL5Q9NRN9 209 aaKnown RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 GOLGA6AQ9NYA3 693 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CPNE7Q9UBL6 633 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CFAP45Q9UL16 551 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CNOT6Q9ULM6 557 aaKnown RBP8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 PCDHGB7Q9Y5F8 929 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 CSAG2Q9Y5P2 127 aa8.38□□□□□ -1.07
HMGB1P39-201ENST00000366304 MAP1AP78559 2803 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 SNX2O60749 519 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 TMEM63AO94886 807 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 ATP1A1P05023 1023 aaKnown RBP8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 CAPN1P07384 714 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 TEAD1P28347 426 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 EPHB2P29323 1055 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 VIPR1P32241 457 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 YBEYP58557 167 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 BCL2L1Q07817 233 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 GPS2Q13227 327 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 GRM3Q14832 879 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 PARP15Q460N3 678 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 PRAMEF17Q5VTA0 474 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 SPNS3Q6ZMD2 512 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 ENOSF1Q7L5Y1 443 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 CHST15Q7LFX5 561 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 KCNMB4Q86W47 210 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 GALNT13Q8IUC8 556 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 TMEM151BQ8IW70 566 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 ZBTB2Q8N680 514 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 GLIS1Q8NBF1 620 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 CPA5Q8WXQ8 436 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 KLHL6Q8WZ60 621 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 COX14Q96I36 57 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 PKNOX2Q96KN3 472 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 PLEKHG4BQ96PX9 1271 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 GPR87Q9BY21 358 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 SLC39A8Q9C0K1 460 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 FARSAQ9Y285 508 aaKnown RBP8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 B3GNT3Q9Y2A9 372 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 PCDHGC4Q9Y5F7 938 aa8.37□□□□□ -1.07
HMGB1P39-201ENST00000366304 IGHV5-51A0A0C4DH38 117 aa8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 SSU72P8A0A1W2PR75 194 aa8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 LILRA5A6NI73 299 aa8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 C2CD4BA6NLJ0 364 aa8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 K7ELQ4 463 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 HTRA2O43464 458 aaPredicted RBP8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 WFS1O76024 890 aa8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 UBXN7O94888 489 aa8.36□□□□□ -1.07
HMGB1P39-201ENST00000366304 ACP5P13686 325 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms