RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 NAE1Q13564 534 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 AAGABQ6PD74 315 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 DLK2Q6UY11 383 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 DHDDSQ86SQ9 333 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SLC35B2Q8TB61 432 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 C19orf60Q96EN9 201 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 ACAT2Q9BWD1 397 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 LRMDAQ9H2I8 198 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 ZC4H2Q9NQZ6 224 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 STMN3Q9NZ72 180 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 LRRC14BA6NHZ5 514 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 GOT2P00505 430 aaKnown RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 TRBC1P01850 177 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 BMP7P18075 431 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 CYP4F8P98187 520 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 INAQ16352 499 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 MSANTD2Q6P1R3 559 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 BRAT1Q6PJG6 821 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SCIMPQ6UWF3 145 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 TMPRSS11BQ86T26 416 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 PXYLP1Q8TE99 480 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 CENPIQ92674 756 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 SLCO2A1Q92959 643 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 NXNL1Q96CM4 212 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 TBC1D10AQ9BXI6 508 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 RHOBTB2Q9BYZ6 727 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 RGPD8O14715 1765 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 SMIM31A0A1B0GVY4 71 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 A0A1W2PRU2 124 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 TRIM24O15164 1050 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SNAP91O60641 907 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 BUD31P41223 144 aaPredicted RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 MED27Q6P2C8 311 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SNX20Q7Z614 316 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 C1orf50Q9BV19 199 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 NUSAP1Q9BXS6 441 aaKnown RBP13.39□□□□□ -0.27
LDB3-202ENST00000361373 IPPKQ9H8X2 491 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SLC24A3Q9HC58 644 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 SLC17A7Q9P2U7 560 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 GULP1Q9UBP9 304 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 TLL2Q9Y6L7 1015 aa13.39□□□□□ -0.27
LDB3-202ENST00000361373 LRP6O75581 1613 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ATP6AP2A0A1C7CYW4 349 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 DNAJA2O60884 412 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ATP6AP2O75787 350 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 UROSP10746 265 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 PTGIRP43119 386 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ESRP1Q6NXG1 681 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 OFCC1Q8IZS5 231 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ZNF248Q8NDW4 579 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 MTERF3Q96E29 417 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 VRTNQ9H8Y1 702 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 CERS4Q9HA82 394 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SALL4Q9UJQ4 1053 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 GTPBP1O00178 669 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 PI15O43692 258 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 MT-CYBP00156 380 aaPredicted RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 SOD2P04179 222 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 CCDC159P0C7I6 412 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ALPPL2P10696 532 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 EDNRBP24530 442 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 CDH5P33151 784 aaPredicted RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 ST13P50502 369 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 CCNYL2Q5T2Q4 361 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 IRGCQ6NXR0 463 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 GALNT18Q6P9A2 607 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 CFAP206Q8IYR0 622 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 RCN3Q96D15 328 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 TRAPPC9Q96Q05 1148 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SUV39H2Q9H5I1 410 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SLCO1B3Q9NPD5 702 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 RPRD1BQ9NQG5 326 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 DNAJC28Q9NX36 388 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 CLDN4O14493 209 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SUV39H1O43463 412 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 HAPLN1P10915 354 aaPredicted RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 C4BPBP20851 252 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ITPKAP23677 461 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 TRIM16LQ309B1 348 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 TAF8Q7Z7C8 310 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SERINC5Q86VE9 423 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 CPSF7Q8N684 471 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 AVL9Q8NBF6 648 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 ELAC1Q9H777 363 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SAMD4AQ9UPU9 718 aaKnown RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 POLR3HQ9Y535 204 aaPredicted RBP13.38□□□□□ -0.27
LDB3-202ENST00000361373 ZNF623O75123 536 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SLC25A12O75746 678 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 TM7SF2O76062 418 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 PRPS2P11908 318 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 STX4Q12846 297 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 FBXW8Q8N3Y1 598 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 SCAIQ8N9R8 606 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 TLR9Q9NR96 1032 aa13.38□□□□□ -0.27
LDB3-202ENST00000361373 PNPOQ9NVS9 261 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms