RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 DEFA5Q01523 94 aa15.96■□□□□ 0.14
COL18A1-203ENST00000359759 KLF10Q13118 480 aa15.96■□□□□ 0.14
COL18A1-203ENST00000359759 PRAMEF19Q5SWL8 479 aa15.96■□□□□ 0.14
COL18A1-203ENST00000359759 LDB1Q86U70 411 aaPredicted RBP15.96■□□□□ 0.14
COL18A1-203ENST00000359759 UBR7Q8N806 425 aa15.96■□□□□ 0.14
COL18A1-203ENST00000359759 TWIST2Q8WVJ9 160 aa15.96■□□□□ 0.14
COL18A1-203ENST00000359759 ADARB2Q9NS39 739 aaKnown RBP15.96■□□□□ 0.14
COL18A1-203ENST00000359759 TARBP1Q13395 1621 aaKnown RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 C1QTNF3-AMACRE9PGA6 284 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 ANGPTL1O95841 491 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 CCNE2O96020 404 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 GCNT6Q5T4J0 391 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 OTOP3Q7RTS5 596 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 HELQQ8TDG4 1101 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 EXOSC8Q96B26 276 aaKnown RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 VWA7Q9Y334 891 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 KMOO15229 486 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 NOBOXO60393 691 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SPATA31D3P0C874 917 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 UROSP10746 265 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 COL6A1P12109 1028 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SP140Q13342 867 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 PPM1JQ5JR12 505 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SPATA31D4Q6ZUB0 917 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 PIGZQ86VD9 579 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 LPGAT1Q92604 370 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 NMUR2Q9GZQ4 415 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 KCNN2Q9H2S1 579 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 TRMUO75648 421 aaKnown RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 ERBB2P04626 1255 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 LGALS2P05162 132 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 PSKH1P11801 424 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 EFNA1P20827 205 aaPredicted RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SNX20Q7Z614 316 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 RBM15BQ8NDT2 890 aaKnown RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 ADAMTS15Q8TE58 950 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 PMEPA1Q969W9 287 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF570Q96NI8 536 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 FEM1AQ9BSK4 669 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 MRPL9Q9BYD2 267 aaKnown RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 PCDHB9Q9Y5E1 797 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SPHKAPQ2M3C7 1700 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 CSN2P05814 226 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 NT5EP21589 574 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 C2orf80Q0P641 193 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 RUNDC3AQ59EK9 446 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 HECTD2Q5U5R9 776 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 FAM13CQ8NE31 585 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 CD84Q9UIB8 345 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 FBXO5Q9UKT4 447 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 BBIP1A8MTZ0 92 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SLC30A4O14863 429 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 ITGB1P05556 798 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 RNASEH2BQ5TBB1 312 aaKnown RBP15.95■□□□□ 0.14
COL18A1-203ENST00000359759 SLC9A4Q6AI14 798 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 KCTD8Q6ZWB6 473 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 CHSY3Q70JA7 882 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 LRTM1Q9HBL6 345 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 KCNE2Q9Y6J6 123 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 NEXMIFQ5QGS0 1516 aa15.95■□□□□ 0.14
COL18A1-203ENST00000359759 ACTR3P61158 418 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 SF1Q15637 639 aaKnown RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 HM13Q8TCT9 377 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 DHRS1Q96LJ7 313 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 JSRP1Q96MG2 331 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 PORCNQ9H237 461 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 H3BNH8 94 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 SMAD9O15198 467 aaKnown RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 GJB1P08034 283 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 UBAP2Q5T6F2 1119 aaKnown RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 FAM83AQ86UY5 434 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 C7orf57Q8NEG2 295 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 PRDM4Q9UKN5 801 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 AIREO43918 545 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 ELFN1P0C7U0 828 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 TGFB3P10600 412 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 PSMA1P25786 263 aaKnown RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 ACSS3Q9H6R3 686 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 TUBA8Q9NY65 449 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 GRHL1Q9NZI5 618 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 TESMINQ9Y4I5 508 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 TEX46H3BTG2 121 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 PRLP01236 227 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 ECT2LQ008S8 904 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 OCLNQ16625 522 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 NDRG1Q92597 394 aaKnown RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 TNFRSF25Q93038 417 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 NUP50Q9UKX7 468 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 RAB26Q9ULW5 256 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF135P52742 658 aaPredicted RBP15.94■□□□□ 0.14
COL18A1-203ENST00000359759 SLC43A3Q8NBI5 491 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 PIK3R3Q92569 461 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 ERVK-5Q9HDB9 667 aa15.94■□□□□ 0.14
COL18A1-203ENST00000359759 TCRBV5S4A2TA0A5A2 114 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 YDJCA8MPS7 323 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ATP6V0D1P61421 351 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ZNF234Q14588 700 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 C1orf189Q5VU69 101 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 TRABD2AQ86V40 505 aa15.93■□□□□ 0.14
COL18A1-203ENST00000359759 ANKRD46Q86W74 232 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms