RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 HNRNPH1P31943 449 aaKnown RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 NR1I3Q14994 352 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 SLC9B1Q4ZJI4 515 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 METTL27Q8N6F8 245 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 Q96MT0 163 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 AP2A2O94973 939 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ZNF234Q14588 700 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 INTS11Q5TA45 600 aaKnown RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 C3orf33Q6P1S2 294 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 PRMT9Q6P2P2 845 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 SPESP1Q6UW49 350 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CHSY3Q70JA7 882 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CHST9Q7L1S5 443 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ANKS1BQ7Z6G8 1248 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ECHDC2Q86YB7 292 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 PCDH20Q8N6Y1 951 aaKnown RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 KCTD4Q8WVF5 259 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 NXPE2Q96DL1 559 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 C11orf24Q96F05 449 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 FAM205AQ6ZU69 1335 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 MAGEA13PA6NCF6 341 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 PPP1R3GB7ZBB8 358 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 MRASO14807 208 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 LGR5O75473 907 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 C22orf31O95567 290 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 MAXP61244 160 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 HNRNPKP61978 463 aaKnown RBP eCLIP9.72□□□□□ -0.852e-6■■■■□ 25.9
CHD3-202ENST00000358181 CRADDP78560 199 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 HSPB3Q12988 150 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 MLC1Q15049 377 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 SCGB2B2Q4G0G5 96 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 UBXN11Q5T124 520 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 GRTP1Q5TC63 336 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 KLHDC7AQ5VTJ3 777 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 VITQ6UXI7 678 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CCDC36Q8IYA8 594 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 TNFAIP8L1Q8WVP5 186 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 AKAP1Q92667 903 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHD3-202ENST00000358181 SLC47A1Q96FL8 570 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 KLHL5Q96PQ7 755 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 FAM86C2PA6NEL3 165 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 CNOT4O95628 575 aaKnown RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 IL1AP01583 271 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 FGBP02675 491 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 INSRRP14616 1297 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 KELP23276 732 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 PON1P27169 355 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 MAPK8P45983 427 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ALDH5A1P51649 535 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 ITGB3BPQ13352 177 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 TMEM35AQ53FP2 167 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ZNF549Q6P9A3 640 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 FAM83AQ86UY5 434 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ERO1BQ86YB8 467 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 IL22RA1Q8N6P7 574 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 POU5F2Q8N7G0 328 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 POC5Q8NA72 575 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 COPS5Q92905 334 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 TATDN2Q93075 761 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 PTERQ96BW5 349 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 RTFDC1Q9BY42 306 aaPredicted RBP9.72□□□□□ -0.85
CHD3-202ENST00000358181 TSPAN16Q9UKR8 245 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 FKBP7Q9Y680 259 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 PMF1-BGLAPU3KQ54 211 aa9.72□□□□□ -0.85
CHD3-202ENST00000358181 ANXA2P2A6NMY6 339 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 C9IYK1 514 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ENPP3O14638 875 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 OR1F1O43749 312 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 STBD1O95210 358 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ANXA2P07355 339 aaKnown RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 ITGA5P08648 1049 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 HOXA7P31268 230 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 GJA9P57773 515 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 KCNJ2P63252 427 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 LPAL2Q16609 132 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 TMEM63BQ5T3F8 832 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ETNPPLQ8TBG4 499 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 RBM18Q96H35 190 aaKnown RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 HIC2Q96JB3 615 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 BLOC1S4Q9NUP1 217 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 TAGLN3Q9UI15 199 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ZNF221Q9UK13 617 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 FBXO9Q9UK97 447 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 MAGED1Q9Y5V3 778 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 PPRC1Q5VV67 1664 aaKnown RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 MID1O15344 667 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 EIF3HO15372 352 aaKnown RBP eCLIP9.71□□□□□ -0.855e-6■■■□□ 14.9
CHD3-202ENST00000358181 LDB2O43679 373 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 CYP1A1P04798 512 aaPredicted RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 ACRP10323 421 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 SPAM1P38567 509 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 ALG10BQ5I7T1 473 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 LRRC73Q5JTD7 316 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 CARD17Q5XLA6 110 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 LSM14AQ8ND56 463 aaKnown RBP9.71□□□□□ -0.85
CHD3-202ENST00000358181 OR52K2Q8NGK3 314 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 XAGE5Q8WWM1 108 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 HPS1Q92902 700 aa9.71□□□□□ -0.85
CHD3-202ENST00000358181 TRAPPC9Q96Q05 1148 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms