RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 A0A1W2PQ72 361 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 C9IYK1 514 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 H3BMQ9 156 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ASNA1O43681 348 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 TRIM23P36406 574 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 HPCAL1P37235 193 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 CDH6P55285 790 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 VBP1P61758 197 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 MADCAM1Q13477 382 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.78□□□□□ -0.68
SND1-201ENST00000354725 ATF7IP2Q5U623 682 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 GDF6Q6KF10 455 aaPredicted RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 LYSMD3Q7Z3D4 306 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ZBTB33Q86T24 672 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 SLC9B2Q86UD5 537 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ARID3BQ8IVW6 561 aaPredicted RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 TMEM130Q8N3G9 435 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 LEMD2Q8NC56 503 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 FANK1Q8TC84 345 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 RXFP2Q8WXD0 754 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ARNTL2Q8WYA1 636 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 MARC2Q969Z3 335 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 TRIM43Q96BQ3 446 aaPredicted RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 DEPDC7Q96QD5 511 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 TMEM106CQ9BVX2 250 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 RHOBTB2Q9BYZ6 727 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ANLNQ9NQW6 1124 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 IFT80Q9P2H3 777 aaPredicted RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 NME7Q9Y5B8 376 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 MAGEB16A2A368 324 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 MEN1O00255 615 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 TNNC2P02585 160 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 RAG1P15918 1043 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ARHGDIAP52565 204 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 SSPNQ14714 243 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 EEF1DP3Q658K8 133 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 MTFMTQ96DP5 389 aaKnown RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 TBATAQ96M53 351 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 BRD9Q9H8M2 597 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 MINDY3Q9H8M7 445 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 NFKBIL1Q9UBC1 381 aaPredicted RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 ENOPH1Q9UHY7 261 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 SF3B1O75533 1304 aaKnown RBP eCLIP10.78□□□□□ -0.683e-6■■■■■ 56.2
SND1-201ENST00000354725 CDH23Q9H251 3354 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 TRANK1O15050 2925 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 H3BRB1 525 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 SCAMP3O14828 347 aaKnown RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 B4GALT5O43286 388 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ENO1P06733 434 aaKnown RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 PEX6Q13608 980 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 CA9Q16790 459 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 FUT11Q495W5 492 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 AARS2Q5JTZ9 985 aaKnown RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 C6orf52Q5T4I8 152 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 FAM160B1Q5W0V3 765 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ZNF852Q6ZMS4 543 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 C1orf122Q6ZSJ8 110 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 ZBTB46Q86UZ6 589 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 HERC6Q8IVU3 1022 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 AFAP1L2Q8N4X5 818 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 SIMC1Q8NDZ2 872 aa10.78□□□□□ -0.68
SND1-201ENST00000354725 PIWIL2Q8TC59 973 aaKnown RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 SPTBN5Q9NRC6 3674 aaKnown RBP10.78□□□□□ -0.68
SND1-201ENST00000354725 EVPLLA8MZ36 301 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 I3L4J1 428 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 KCNN4O15554 427 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 PLIN3O60664 434 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 SEMA3DO95025 777 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 SMIM10L2AP0DMW4 78 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 SMIM10L2BP0DMW5 78 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 CXCL8P10145 99 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 ITGB8P26012 769 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 TFAMQ00059 246 aaKnown RBP10.77□□□□□ -0.68
SND1-201ENST00000354725 SP4Q02446 784 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 OCA2Q04671 838 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 RAD51Q06609 339 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 MGAT3Q09327 533 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 ZNF667Q5HYK9 610 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 FAM209BQ5JX69 171 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 LGSNQ5TDP6 509 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 ZNF321PQ8N8H1 164 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 GRIN3AQ8TCU5 1115 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 KCTD4Q8WVF5 259 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 DOK1Q99704 481 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 ADPGKQ9BRR6 497 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 TRIM56Q9BRZ2 755 aaKnown RBP10.77□□□□□ -0.68
SND1-201ENST00000354725 RAD21L1Q9H4I0 556 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 NEUROD4Q9HD90 331 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 TBX21Q9UL17 535 aa10.77□□□□□ -0.68
SND1-201ENST00000354725 PDPK1O15530 556 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 DYRK3O43781 588 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 DNAJB5O75953 348 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 H6PDO95479 791 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 POP4O95707 220 aaKnown RBP10.77□□□□□ -0.69
SND1-201ENST00000354725 PROCP04070 461 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 URODP06132 367 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 HTR2BP41595 481 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 ABCG1P45844 678 aa10.77□□□□□ -0.69
SND1-201ENST00000354725 KCNJ5P48544 419 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms