RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PDLIM5Q96HC4 596 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 NAF1Q96HR8 494 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF570Q96NI8 536 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 SLC30A3Q99726 388 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 S100A14Q9HCY8 104 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 UTP6Q9NYH9 597 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 APPL1Q9UKG1 709 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 IKZF3Q9UKT9 509 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 INTS6Q9UL03 887 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 LZTS1Q9Y250 596 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
SAMM50-201ENST00000350028 DHRS7Q9Y394 339 aa16.57■□□□□ 0.24
SAMM50-201ENST00000350028 NPEPPSL1A6NEC2 478 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 CCL16O15467 120 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 RPS17P08708 135 aaKnown RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 SERPINA4P29622 427 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 PTPN5P54829 565 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 CLCQ05315 142 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 PPIGQ13427 754 aaKnown RBP eCLIP16.56■□□□□ 0.249e-7■■■□□ 15.9
SAMM50-201ENST00000350028 MUM1Q2TAK8 710 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 PITRM1Q5JRX3 1037 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 BNC2Q6ZN30 1099 aaPredicted RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 SNX20Q7Z614 316 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 HPS6Q86YV9 775 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 CBARPQ8N350 705 aaPredicted RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 GRIN3AQ8TCU5 1115 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 SLC22A17Q8WUG5 538 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 EEF1AKMT1Q8WVE0 214 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 NRG4Q8WWG1 115 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 DNAJC9Q8WXX5 260 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 C19orf60Q96EN9 201 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 LINGO1Q96FE5 620 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 TCF25Q9BQ70 676 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 HELZP42694 1942 aaKnown RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 A0A0U1RQS6 177 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 C1orf232A0A0U1RR37 186 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 CAPN8A6NHC0 703 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 LRRC14BA6NHZ5 514 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 PSMD12O00232 456 aaPredicted RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 NRG2O14511 850 aaPredicted RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 ZNF821O75541 412 aaPredicted RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 SRCP12931 536 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 ITGALP20701 1170 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 HNF1BP35680 557 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 EPHA5P54756 1037 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 ERVFC1P60507 584 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 LCP2Q13094 533 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 CCNIQ14094 377 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 PTK2BQ14289 1009 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 CDKN3Q16667 212 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 DGKKQ5KSL6 1271 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 KANK2Q63ZY3 851 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 GPSM1Q86YR5 675 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 SHKBP1Q8TBC3 707 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 TRPC4APQ8TEL6 797 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 TUBGCP5Q96RT8 1024 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 MRPL1Q9BYD6 325 aaKnown RBP16.56■□□□□ 0.24
SAMM50-201ENST00000350028 NMRK1Q9NWW6 199 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 WASF2Q9Y6W5 498 aa16.56■□□□□ 0.24
SAMM50-201ENST00000350028 MTCL1Q9Y4B5 1905 aaKnown RBP16.55■□□□□ 0.24
SAMM50-201ENST00000350028 SOBPA7XYQ1 873 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 GRM6O15303 877 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 ACADSP16219 412 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 ATP6V1C1P21283 382 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CLCN7P51798 805 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 IRX1P78414 480 aaPredicted RBP16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CDC16Q13042 620 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 FASTKQ14296 549 aaKnown RBP16.55■□□□□ 0.24
SAMM50-201ENST00000350028 PPP1R3AQ16821 1122 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 ARHGAP15Q53QZ3 475 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 GRAMD4Q6IC98 578 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CYHR1Q6ZMK1 362 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 EFL1Q7Z2Z2 1120 aaKnown RBP16.55■□□□□ 0.24
SAMM50-201ENST00000350028 SERPINA9Q86WD7 417 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CPNE9Q8IYJ1 553 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CMTM8Q8IZV2 173 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 RBFAQ8N0V3 343 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 MRPL43Q8N983 215 aaKnown RBP16.55■□□□□ 0.24
SAMM50-201ENST00000350028 NSUN5Q96P11 429 aaKnown RBP16.55■□□□□ 0.24
SAMM50-201ENST00000350028 LYSMD1Q96S90 227 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CDRT15Q96T59 188 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 CLPBQ9H078 707 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 TNKS2Q9H2K2 1166 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 ASB8Q9H765 288 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 WDR41Q9HAD4 459 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 BCAP29Q9UHQ4 241 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 HS3ST2Q9Y278 367 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 DNAJC15Q9Y5T4 150 aa16.55■□□□□ 0.24
SAMM50-201ENST00000350028 TRBV5-4A0A0C4DH59 114 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 MAP3K7O43318 606 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 SNX2O60749 519 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 VPS4BO75351 444 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 CLDN7O95471 211 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 PRAMEF1O95521 474 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 MLYCDO95822 493 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 ENO3P13929 434 aaPredicted RBP16.54■□□□□ 0.24
SAMM50-201ENST00000350028 PTPN2P17706 415 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 CCR2P41597 374 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 ACADVLP49748 655 aa16.54■□□□□ 0.24
SAMM50-201ENST00000350028 STX1BP61266 288 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms