RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SUN5Q8TC36 379 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 DYNC2LI1Q8TCX1 351 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 ZFYVE19Q96K21 471 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 FEM1AQ9BSK4 669 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 TRIM39Q9HCM9 518 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 N6AMT1Q9Y5N5 214 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 LTBP1Q14766 1721 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 PCMT1P22061 227 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 ATP4BP51164 291 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 CHRNB3Q05901 458 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 PKN3Q6P5Z2 889 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 CCBE1Q6UXH8 406 aaPredicted RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 DCP2Q8IU60 420 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 NPWQ8N729 165 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 ASCC1Q8N9N2 400 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 ZHX1-C8orf76Q96EF9 292 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 U3KQV3 271 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 SCN4AP35499 1836 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 FADS2O95864 444 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 IQCF3P0C7M6 154 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 ENDOUP21128 410 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 RBP5P82980 135 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 TNFAIP2Q03169 654 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 MXD4Q14582 209 aaPredicted RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 SNAP47Q5SQN1 464 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 LAIR2Q6ISS4 152 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 PAPD5Q8NDF8 572 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 OR52K2Q8NGK3 314 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 BPIFB1Q8TDL5 484 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 LPAR1Q92633 364 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 PROX1Q92786 737 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 MBOAT4Q96T53 435 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 KIFC1Q9BW19 673 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 TRIM54Q9BYV2 358 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 REXO4Q9GZR2 422 aaKnown RBP15.26■□□□□ 0.03
LMNA-201ENST00000347559 ADPRHL2Q9NX46 363 aa15.26■□□□□ 0.03
LMNA-201ENST00000347559 CNTNAP1P78357 1384 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 PPEF2O14830 753 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 PRKCAP17252 672 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 POLR2EP19388 210 aaKnown RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 TPI1P60174 286 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 CDC20Q12834 499 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 SLC10A6Q3KNW5 377 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 GPR158Q5T848 1215 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 TTC23LQ6PF05 361 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 LDB1Q86U70 411 aaPredicted RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 PEX5LQ8IYB4 626 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 FRS2Q8WU20 508 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 PPM1MQ96MI6 270 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 NSUN5Q96P11 429 aaKnown RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 YME1L1Q96TA2 773 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 ZNF221Q9UK13 617 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 PRELID1Q9Y255 219 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 NME7Q9Y5B8 376 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 SNX10Q9Y5X0 201 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 PDZK1P1A8MUH7 402 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 H0Y626 953 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 UBXN8O00124 270 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 CRCPO75575 148 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 TRIM16O95361 564 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 SLC4A1P02730 911 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 LBPP18428 481 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 IMPDH1P20839 514 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 BST2Q10589 180 aaKnown RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 TRIP4Q15650 581 aaPredicted RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 PCID2Q5JVF3 399 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 BLOC1S3Q6QNY0 202 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 MICU2Q8IYU8 434 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 FAM86B1Q8N7N1 296 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 KIF12Q96FN5 646 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 AURKBQ96GD4 344 aaPredicted RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 DEPDC7Q96QD5 511 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 NECTIN3Q9NQS3 549 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 MGAMO43451 1857 aa15.25■□□□□ 0.03
LMNA-201ENST00000347559 ZNF638Q14966 1978 aaKnown RBP15.25■□□□□ 0.03
LMNA-201ENST00000347559 BPTFQ12830 3046 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 FAM172BPA6NC97 362 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 ERI2A8K979 691 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 CENPBD1B2RD01 187 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 CNTN5O94779 1100 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 CST1P01037 141 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 FTH1P02794 183 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 RBP1P09455 135 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 ARNTP27540 789 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 MATKP42679 507 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 ACADSBP45954 432 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 MTPNP58546 118 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 PAFAH1B3Q15102 231 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 FAM98BQ52LJ0 330 aaKnown RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 UNC50Q53HI1 259 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 SULT1C3Q6IMI6 304 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 FKBP9P1Q75LS8 142 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 PDZD4Q76G19 769 aaPredicted RBP15.24■□□□□ 0.03
LMNA-201ENST00000347559 SVOPQ8N4V2 548 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 LGALS12Q96DT0 336 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 CEP295NLQ96MC4 621 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 RHNO1Q9BSD3 238 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 FICDQ9BVA6 458 aa15.24■□□□□ 0.03
LMNA-201ENST00000347559 GTF2IRD1Q9UHL9 959 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms