RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CFAP99D6REC4 459 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 H7C0S8 307 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 PFDN6O15212 129 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 INPP4BO15327 924 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 RAD51CO43502 376 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 VEGFDO43915 354 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 PCDHGA12O60330 932 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 SRP72O76094 671 aaKnown RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 PRAMEF1O95521 474 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 NME1P15531 152 aaKnown RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 MGAT1P26572 445 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 HK3P52790 923 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 ARL4CP56559 192 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 TMPRSS15P98073 1019 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 BNC1Q01954 994 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 NFATC2Q13469 925 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 GTF2H3Q13889 308 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 ELOCQ15369 112 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CHRNA6Q15825 494 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CCDC38Q502W7 563 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 PRAMEF14Q5SWL7 426 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 TSTD2Q5T7W7 516 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 ANKRD22Q5VYY1 191 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 SNX20Q7Z614 316 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CCNJLQ8IV13 435 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 FSTL5Q8N475 847 aaPredicted RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 MMGT1Q8N4V1 131 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 OR13C4Q8NGS5 318 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 OR6P1Q8NGX9 317 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 GABPB2Q8TAK5 448 aaPredicted RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 DCUN1D1Q96GG9 259 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CDKN2AIPNLQ96HQ2 116 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 DNAJC1Q96KC8 554 aaKnown RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 TBATAQ96M53 351 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 SERPINB12Q96P63 405 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 AGAP2Q99490 1192 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 TRIM51Q9BSJ1 452 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 ASB8Q9H765 288 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 MRM3Q9HC36 420 aaKnown RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 CHRAC1Q9NRG0 131 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 FKBPLQ9UIM3 349 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CRLS1Q9UJA2 301 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CDV3Q9UKY7 258 aaKnown RBP11.74□□□□□ -0.53
SNCA-202ENST00000345009 DOLKQ9UPQ8 538 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 SNX24Q9Y343 169 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 KCTD3Q9Y597 815 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 MAD1L1Q9Y6D9 718 aa11.74□□□□□ -0.53
SNCA-202ENST00000345009 CFAP54Q96N23 3096 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CNOT1A5YKK6 2376 aaKnown RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 TMEM202A6NGA9 273 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 F8W8V4 182 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CDX4O14627 284 aaPredicted RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 PLXNA2O75051 1894 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 TMEM63AO94886 807 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 SOD1P00441 154 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 IVLP07476 585 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 ALPPL2P10696 532 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 PSMA3P25788 255 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 IVDP26440 423 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 MC4RP32245 332 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 GRK6P43250 576 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 ITGA8P53708 1063 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 DRG2P55039 364 aaKnown RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 TUBB4BP68371 445 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CACNG1Q06432 222 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 EIF2B5Q13144 721 aaKnown RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 HIF1AQ16665 826 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 ATP13A5Q4VNC0 1218 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 ZNF542PQ5EBM4 170 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 ZRANB3Q5FWF4 1079 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 AARS2Q5JTZ9 985 aaKnown RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 LYPLAL1Q5VWZ2 237 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 HIBCHQ6NVY1 386 aaPredicted RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 AFTPHQ6ULP2 937 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CERS6Q6ZMG9 384 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 TAS2R42Q7RTR8 314 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CAND1Q86VP6 1230 aaKnown RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 PHACTR4Q8IZ21 702 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 LRRC39Q96DD0 335 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 COX14Q96I36 57 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 ZNF514Q96K75 400 aaPredicted RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 SPSB2Q99619 263 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 TMUB1Q9BVT8 246 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 KIFC1Q9BW19 673 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 LGR4Q9BXB1 951 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CYP4F12Q9HCS2 524 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 SMOXQ9NWM0 555 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 APOBEC3BQ9UH17 382 aaKnown RBP11.73□□□□□ -0.53
SNCA-202ENST00000345009 SOX13Q9UN79 622 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 SLC17A4Q9Y2C5 497 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 CSNK1G3Q9Y6M4 447 aa11.73□□□□□ -0.53
SNCA-202ENST00000345009 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
SNCA-202ENST00000345009 FAM237BA0A1B0GVD1 139 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 PRSS38A1L453 326 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 FADS2P1A8MWK0 482 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 FLRT2O43155 660 aa11.72□□□□□ -0.53
SNCA-202ENST00000345009 GDF9O60383 454 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms