RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 EPB41L5Q9HCM4 733 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 TRIM39Q9HCM9 518 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 THSD1Q9NS62 852 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.92■□□□□ 0.14
ATG4B-201ENST00000344376 PKP3Q9Y446 797 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 PLEKHM1Q9Y4G2 1056 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 ADGRG1Q9Y653 693 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 CAPN6Q9Y6Q1 641 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 APC2O95996 2303 aa15.92■□□□□ 0.14
ATG4B-201ENST00000344376 MYLKQ15746 1914 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 ZZEF1O43149 2961 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 A0A087WV48 116 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 A0A1W2PQM1 296 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 AURKAO14965 403 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 DDX3YO15523 660 aaKnown RBP15.91■□□□□ 0.14
ATG4B-201ENST00000344376 TLX3O43711 291 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-201ENST00000344376 NRDCO43847 1150 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 NUAK1O60285 661 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 SLC2A4P14672 509 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 SPAM1P38567 509 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 CHRNA4P43681 627 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 PDX1P52945 283 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 ERVPABLB-1P60509 514 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 EIF3IQ13347 325 aaKnown RBP15.91■□□□□ 0.14
ATG4B-201ENST00000344376 MAP9Q49MG5 647 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 NAGSQ8N159 534 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 LIN37Q96GY3 246 aaPredicted RBP15.91■□□□□ 0.14
ATG4B-201ENST00000344376 HES6Q96HZ4 224 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 STN1Q9H668 368 aaKnown RBP15.91■□□□□ 0.14
ATG4B-201ENST00000344376 BPIFA1Q9NP55 256 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 ATXN10Q9UBB4 475 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 GUCA1BQ9UMX6 200 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 LHX6Q9UPM6 363 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 PRKAB1Q9Y478 270 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 PCDHGA8Q9Y5G5 932 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 ST14Q9Y5Y6 855 aa15.91■□□□□ 0.14
ATG4B-201ENST00000344376 ACACAQ13085 2346 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 PKD1L2Q7Z442 2459 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 PPFIA2O75334 1257 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ACP5P13686 325 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 PSMB4P28070 264 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ALDH4A1P30038 563 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 CCKBRP32239 447 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 MLLT3P42568 568 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ABCG1P45844 678 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 GPR3P46089 330 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 PCBP4P57723 403 aaKnown RBP15.9■□□□□ 0.14
ATG4B-201ENST00000344376 CLPPQ16740 277 aaPredicted RBP15.9■□□□□ 0.14
ATG4B-201ENST00000344376 SEL1L2Q5TEA6 688 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 FOXR1Q6PIV2 292 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 C19orf48Q6RUI8 117 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 IGF2-ASQ6U949 168 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ARHGEF18Q6ZSZ5 1173 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ZNF438Q7Z4V0 828 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 TTC30BQ8N4P2 665 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 GDAP1Q8TB36 358 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 CCDC110Q8TBZ0 833 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 HNRNPLLQ8WVV9 542 aaKnown RBP15.9■□□□□ 0.14
ATG4B-201ENST00000344376 PATE1Q8WXA2 126 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ANP32BQ92688 251 aaKnown RBP15.9■□□□□ 0.14
ATG4B-201ENST00000344376 VPS35Q96QK1 796 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ARFGAP3Q9NP61 516 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 ASXL3Q9C0F0 2248 aa15.9■□□□□ 0.14
ATG4B-201ENST00000344376 CASC3O15234 703 aaKnown RBP15.89■□□□□ 0.13
ATG4B-201ENST00000344376 VEGFDO43915 354 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 CPNE6O95741 557 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 AGTP01019 485 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 ZNF8P17098 575 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-201ENST00000344376 EIF2S3P41091 472 aaKnown RBP15.89■□□□□ 0.13
ATG4B-201ENST00000344376 B4GALNT1Q00973 533 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 GTF2H3Q13889 308 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 NR1D2Q14995 579 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 AMZ1Q400G9 498 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 B3GNT8Q7Z7M8 397 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 DTX3LQ8TDB6 740 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 ALS2CR12Q96Q35 445 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 FOXP3Q9BZS1 431 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 ZCCHC2Q9C0B9 1178 aaKnown RBP15.89■□□□□ 0.13
ATG4B-201ENST00000344376 ATXN7L1Q9ULK2 861 aaPredicted RBP15.89■□□□□ 0.13
ATG4B-201ENST00000344376 KCNK6Q9Y257 313 aa15.89■□□□□ 0.13
ATG4B-201ENST00000344376 C2orf81A6NN90 581 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 STX7O15400 261 aaKnown RBP15.88■□□□□ 0.13
ATG4B-201ENST00000344376 OR1D5P58170 312 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 KLF1Q13351 362 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-201ENST00000344376 ITGA9Q13797 1035 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 INSCQ1MX18 579 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 ATP13A5Q4VNC0 1218 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 ZNF648Q5T619 568 aaPredicted RBP15.88■□□□□ 0.13
ATG4B-201ENST00000344376 CRTC3Q6UUV7 619 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 ADGRG6Q86SQ4 1221 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 PIM3Q86V86 326 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 LRRTM4Q86VH4 590 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 SFRP1Q8N474 314 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 AVL9Q8NBF6 648 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 ZNF248Q8NDW4 579 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 BRSK1Q8TDC3 778 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 SLC37A2Q8TED4 501 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 TTC25Q96NG3 672 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 GORASP1Q9BQQ3 440 aa15.88■□□□□ 0.13
ATG4B-201ENST00000344376 ZMYND15Q9H091 742 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms