RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 BCL2L1Q07817 233 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 IKBKEQ14164 716 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 PCLAFQ15004 111 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 PAFAH1B3Q15102 231 aaKnown RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 TRIP4Q15650 581 aaPredicted RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 ZNF284Q2VY69 593 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 TBC1D25Q3MII6 688 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ZFP69Q49AA0 526 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 CCNYL2Q5T2Q4 361 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 PRRT2Q7Z6L0 340 aaPredicted RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 KLHL32Q96NJ5 620 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 HIPK3Q9H422 1215 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ZDHHC2Q9UIJ5 367 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 DDX60Q8IY21 1712 aaKnown RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 PCP4L1A6NKN8 68 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 TP73O15350 636 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 MSI1O43347 362 aaKnown RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 FAM163BP0C2L3 166 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 OR56A5P0C7T3 313 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 UMPSP11172 480 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 CDK4P11802 303 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ZNF829Q3KNS6 432 aaPredicted RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 CYS1Q717R9 158 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 LUZP2Q86TE4 346 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 UBE2J2Q8N2K1 259 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 HM13Q8TCT9 377 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.84□□□□□ -0.672e-28■■■■■ 30.3
RPL28-201ENST00000344063 PDLIM7Q9NR12 457 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 KLHL3Q9UH77 587 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ENOPH1Q9UHY7 261 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 PIPSLA2A3N6 862 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 MYBPHLA2RUH7 354 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 MANSC4A6NHS7 340 aaPredicted RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 E9PAM4 449 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 EPB42P16452 691 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 SLC7A1P30825 629 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 CCT3P49368 545 aaKnown RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 TRAP1Q12931 704 aaKnown RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 CRY1Q16526 586 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 TRIQKQ629K1 86 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ZNF57Q68EA5 555 aaPredicted RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 EPGNQ6UW88 154 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 PRR23BQ6ZRT6 265 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ANKS3Q6ZW76 656 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 DDX53Q86TM3 631 aaKnown RBP10.84□□□□□ -0.67
RPL28-201ENST00000344063 SELENOMQ8WWX9 145 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ACBD6Q9BR61 282 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 ADPRHL2Q9NX46 363 aa10.84□□□□□ -0.67
RPL28-201ENST00000344063 RBM47A0AV96 593 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 ONECUT3O60422 494 aaPredicted RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 RSL1D1O76021 490 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 ARHGAP1Q07960 439 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 TRIM32Q13049 653 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 PARP15Q460N3 678 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 ZC3H7AQ8IWR0 971 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 MARVELD2Q8N4S9 558 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 LINGO1Q96FE5 620 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 NODALQ96S42 347 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 TRIM8Q9BZR9 551 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 REEP1Q9H902 201 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 TRPV5Q9NQA5 729 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 ARL15Q9NXU5 204 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 GNPTGQ9UJJ9 305 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 DNMT3LQ9UJW3 386 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 MYH4Q9Y623 1939 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 MYO5AQ9Y4I1 1855 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 SLC28A1O00337 649 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 FAM189A1O60320 539 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 RGS20O76081 388 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 IGSF6O95976 241 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 FGF3P11487 239 aaPredicted RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 LCP2Q13094 533 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 GALNT3Q14435 633 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 TAB1Q15750 504 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 SYPL2Q5VXT5 272 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 ADGRG6Q86SQ4 1221 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 RTL3Q8N8U3 475 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 STYXQ8WUJ0 223 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 KCTD13Q8WZ19 329 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 GPR22Q99680 433 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 ITM2CQ9NQX7 267 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 PIGVQ9NUD9 493 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 SLC25A13Q9UJS0 675 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 TREHO43280 583 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 HTRA2O43464 458 aaPredicted RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 TSPAN9O75954 239 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 NDST3O95803 873 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 NTRK1P04629 796 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 RPL38P63173 70 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 GHRHRQ02643 423 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 PRKCQQ04759 706 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 CNTN1Q12860 1018 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 CLEC20AQ6ZU45 233 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 ADCK2Q7Z695 626 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 PLD6Q8N2A8 252 aaKnown RBP10.83□□□□□ -0.68
RPL28-201ENST00000344063 ASB9Q96DX5 294 aa10.83□□□□□ -0.68
RPL28-201ENST00000344063 TBATAQ96M53 351 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms