RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 OSBPL10Q9BXB5 764 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 DGCR6LQ9BY27 220 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 LRRC3Q9BY71 257 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 AMBRA1Q9C0C7 1298 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 ALG9Q9H6U8 611 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 PAK1IP1Q9NWT1 392 aaPredicted RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 DSEQ9UL01 958 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 TNPO2O14787 897 aaKnown RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 LSM1O15116 133 aaKnown RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 TBC1D4O60343 1298 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 GMNNO75496 209 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 MT-CYBP00156 380 aaPredicted RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 C1RP00736 705 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 HGFP14210 728 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 NPR3P17342 541 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 CCNCP24863 283 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 FOXA1P55317 472 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 KCNK10P57789 538 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 OR4D2P58180 307 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SF3B4Q15427 424 aaKnown RBP eCLIP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 ADPRMQ3LIE5 342 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 PM20D1Q6GTS8 502 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 RANBP10Q6VN20 620 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 RBM23Q86U06 439 aaKnown RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 IFNEQ86WN2 208 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SNX29P2Q8IUI4 249 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 DPP10Q8N608 796 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 PDZD8Q8NEN9 1154 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 OR7A2PQ8NGA2 310 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 PTERQ96BW5 349 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF300Q96RE9 604 aaPredicted RBP9.61□□□□□ -0.87
HOXA1-201ENST00000343060 NODALQ96S42 347 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 YME1L1Q96TA2 773 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SEPHS2Q99611 448 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 KLQ9UEF7 1012 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 VPS51Q9UID3 782 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 GJD2Q9UKL4 321 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 USP22Q9UPT9 525 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 NEU3Q9UQ49 428 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 SNX5Q9Y5X3 404 aa9.61□□□□□ -0.87
HOXA1-201ENST00000343060 FAM92AA1XBS5 289 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 M0QX08 132 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 PIRO00625 290 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 KPNA6O60684 536 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 KATNA1O75449 491 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 SOAT2O75908 522 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 BMP1P13497 986 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 RCVRNP35243 200 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 PIGAP37287 484 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 NDUFV1P49821 464 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 PPP5CP53041 499 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 PHC1P78364 1004 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 MEP1AQ16819 746 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 IMPG1Q17R60 797 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 TIGD2Q4W5G0 525 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 XKR7Q5GH72 579 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ATAD3BQ5T9A4 648 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 SLX4IPQ5VYV7 408 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 DCAF15Q66K64 600 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 UGT3A1Q6NUS8 523 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 LBX2Q6XYB7 198 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 AGMOQ6ZNB7 445 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 SLC22A16Q86VW1 577 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 LGI2Q8N0V4 545 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CLEC4FQ8N1N0 589 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 SVOPLQ8N434 492 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 GABPB2Q8TAK5 448 aaPredicted RBP9.6□□□□□ -0.87
HOXA1-201ENST00000343060 NDNFQ8TB73 568 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 C18orf25Q96B23 403 aaPredicted RBP9.6□□□□□ -0.87
HOXA1-201ENST00000343060 TUBGCP3Q96CW5 907 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ERLEC1Q96DZ1 483 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 SPATA33Q96N06 139 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CCDC115Q96NT0 180 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CLSTN3Q9BQT9 956 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 MID1IP1Q9NPA3 183 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF277Q9NRM2 450 aaPredicted RBP9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ATP11BQ9Y2G3 1177 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 RBMX2Q9Y388 322 aaKnown RBP9.6□□□□□ -0.87
HOXA1-201ENST00000343060 H3BMM5 538 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 AREL1O15033 823 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 LRIG2O94898 1065 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CYBBP04839 570 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CD1DP15813 335 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 SERPINB1P30740 379 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 RYKP34925 604 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 NEK2P51955 445 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 DIO3P55073 304 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CDKN2DP55273 166 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 CDH13P55290 713 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 DAOAP59103 153 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ISL1P61371 349 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 IL18R1Q13478 541 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 FBXO47Q5MNV8 452 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ZNF691Q5VV52 312 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 GLYATQ6IB77 296 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 ALKAL1Q6UXT8 129 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 PAQR9Q6ZVX9 377 aa9.6□□□□□ -0.87
HOXA1-201ENST00000343060 STK32CQ86UX6 486 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms