RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SYNDIG1Q9H7V2 258 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 THSD1Q9NS62 852 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 SPATS2LQ9NUQ6 558 aaKnown RBP13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 RABGEF1Q9UJ41 708 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 SHOC2Q9UQ13 582 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 TMEM98Q9Y2Y6 226 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 AAR2Q9Y312 384 aaKnown RBP13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 RNF215Q9Y6U7 377 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 RP1P56715 2156 aa13.22□□□□□ -0.29
SIRPB3P-201ENST00000340424 CCDC187A0A096LP49 1063 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 RHPN2P1A8MT19 583 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 KRT86O43790 486 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 NUAK1O60285 661 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 DNAJC6O75061 913 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 MPOP05164 745 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 RBP3P10745 1247 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 PYGMP11217 842 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 RBL1P28749 1068 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 EIF2S3P41091 472 aaKnown RBP13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 EMP3P54852 163 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 PCBP4P57723 403 aaKnown RBP13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 EIF3EP60228 445 aaKnown RBP13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 BIRC2Q13490 618 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 PRPSAP1Q14558 356 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 SLC1A5Q15758 541 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 SIRPB2Q5JXA9 342 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 TRIM74Q86UV6 250 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 GPR26Q8NDV2 337 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 GLYATL1Q969I3 302 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 ATXN7L3BQ96GX2 97 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 OXNAD1Q96HP4 312 aaPredicted RBP13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 VPS35Q96QK1 796 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 DESI2Q9BSY9 194 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 TRIM39Q9HCM9 518 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 UBP1Q9NZI7 540 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 ZNHIT2Q9UHR6 403 aa13.21□□□□□ -0.29
SIRPB3P-201ENST00000340424 ITPR1Q14643 2758 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 A0A1W2PQM1 296 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 ARHGAP6O43182 974 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 GRID2O43424 1007 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 VEGFDO43915 354 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC25A14O95258 325 aaPredicted RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 ECEL1O95672 775 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 PIRTP0C851 137 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 BPIP17213 487 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 AK4P27144 223 aaPredicted RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 FASLGP48023 281 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 CLCNKAP51800 687 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 PDX1P52945 283 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 INHBCP55103 352 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 CCL7P80098 99 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 ALS2CLQ60I27 953 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 MARK2Q7KZI7 788 aaKnown RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 GLT6D1Q7Z4J2 308 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 NAGSQ8N159 534 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 ZNF248Q8NDW4 579 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 IPMKQ8NFU5 416 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 BRSK1Q8TDC3 778 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 CCDC97Q96F63 343 aaPredicted RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 HES6Q96HZ4 224 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 SPATA13Q96N96 652 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC46A1Q96NT5 459 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 DPYSL5Q9BPU6 564 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 C19orf43Q9BQ61 176 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 HERPUD2Q9BSE4 406 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 STN1Q9H668 368 aaKnown RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 FEZ2Q9UHY8 353 aaPredicted RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 SATB2Q9UPW6 733 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 PKP3Q9Y446 797 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 SPO11Q9Y5K1 396 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 ST14Q9Y5Y6 855 aa13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 OAS3Q9Y6K5 1087 aaKnown RBP13.2□□□□□ -0.3
SIRPB3P-201ENST00000340424 URB1O60287 2271 aaKnown RBP13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ARHGEF17Q96PE2 2063 aaPredicted RBP13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 FAM208BQ5VWN6 2430 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 OR5K4A6NMS3 321 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 CHUKO15111 745 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 KCNN4O15554 427 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 TLX3O43711 291 aaPredicted RBP13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 CPNE6O95741 557 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC4A1P02730 911 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ITGA2BP08514 1039 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 SPAM1P38567 509 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ABCG1P45844 678 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 MAZP56270 477 aaKnown RBP13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 GPLD1P80108 840 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 B4GALNT1Q00973 533 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 PDE1BQ01064 536 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 SQSTM1Q13501 440 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 C3orf38Q5JPI3 329 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ANKRD20A2Q5SQ80 823 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ANKRD20A1Q5TYW2 823 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 ANKRD20A3Q5VUR7 823 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 SFRP1Q8N474 314 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 SLC25A41Q8N5S1 370 aa13.19□□□□□ -0.3
SIRPB3P-201ENST00000340424 Q8N9G6 341 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms