RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 ESRP1Q6NXG1 681 aaKnown RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TMEM53Q6P2H8 277 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ANKS3Q6ZW76 656 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 KCTD8Q6ZWB6 473 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 SLC15A4Q8N697 577 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 PSMG2Q969U7 264 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ZUFSPQ96AP4 578 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 MRGPRX2Q96LB1 330 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TOX2Q96NM4 488 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 CCDC68Q9H2F9 335 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ACOT9Q9Y305 439 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 MICAL3Q7RTP6 2002 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 PEX11BO96011 259 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 HNRNPLP14866 589 aaKnown RBP eCLIP18.69■□□□□ 0.586e-7■■□□□ 13.2
PSPC1-201ENST00000338910 ZNF182P17025 639 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 C1QTNF8P60827 252 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 MPP1Q00013 466 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 NR1D2Q14995 579 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ATP6AP1Q15904 470 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ABRAXAS1Q6UWZ7 409 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TMCO2Q7Z6W1 182 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 LRRC49Q8IUZ0 686 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 SLC41A1Q8IVJ1 513 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 NXNL1Q96CM4 212 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 FBXL20Q96IG2 436 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 CNDP2Q96KP4 475 aaKnown RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 RPRD1AQ96P16 312 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 OLA1Q9NTK5 396 aaKnown RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TMEM248Q9NWD8 314 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 KIAA1522Q9P206 1035 aaPredicted RBP18.69■□□□□ 0.58
PSPC1-201ENST00000338910 SLC2A6Q9UGQ3 507 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 ERGIC3Q9Y282 383 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 TCAF1Q9Y4C2 921 aa18.69■□□□□ 0.58
PSPC1-201ENST00000338910 FAM149AA5PLN7 773 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 TLR5O60602 858 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 DNAJB2P25686 324 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 RENBPP51606 427 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 ZNF460Q14592 562 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 RGS21Q2M5E4 152 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 RANBP10Q6VN20 620 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 SNX31Q8N9S9 440 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 VWCEQ96DN2 955 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 MYEOVQ96EZ4 313 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 C9orf16Q9BUW7 83 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 MRPL46Q9H2W6 279 aaKnown RBP18.68■□□□□ 0.58
PSPC1-201ENST00000338910 ENTPD7Q9NQZ7 604 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 NSMCE4AQ9NXX6 385 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 AURKCQ9UQB9 309 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 B3GNT3Q9Y2A9 372 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 TMED5Q9Y3A6 229 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 FIS1Q9Y3D6 152 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 KIAA0100Q14667 2235 aaKnown RBP18.68■□□□□ 0.58
PSPC1-201ENST00000338910 DHRS12A0PJE2 317 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 AQP12BA6NM10 295 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 H7C4K7 107 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 CLOCKO15516 846 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 PARNO95453 639 aaKnown RBP18.68■□□□□ 0.58
PSPC1-201ENST00000338910 C7P10643 843 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 CD151P48509 253 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 WNT3AP56704 352 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 CTBP1Q13363 440 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 MARC1Q5VT66 337 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 EGFLAMQ63HQ2 1017 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 AQP12AQ8IXF9 295 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 SPATA6LQ8N4H0 392 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 FBXO22Q8NEZ5 403 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 OR9I1Q8NGQ6 314 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 CYGBQ8WWM9 190 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 SLC45A3Q96JT2 553 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 SPATA17Q96L03 361 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 TUBA1CQ9BQE3 449 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 CRISPLD2Q9H0B8 497 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 SP110Q9HB58 689 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 TNFRSF12AQ9NP84 129 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 GID8Q9NWU2 228 aa18.68■□□□□ 0.58
PSPC1-201ENST00000338910 FAM32AQ9Y421 112 aaKnown RBP18.68■□□□□ 0.58
PSPC1-201ENST00000338910 RNF103-CHMP3A0A140T963 221 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 AHSGP02765 367 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 ATF6P18850 670 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 CCT8P50990 548 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 KCNQ1P51787 676 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 DNAJB13P59910 316 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 SEPT6Q14141 434 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 SPRED1Q7Z699 444 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 CEP97Q8IW35 865 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 DENND6AQ8IWF6 608 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 ZC3H7AQ8IWR0 971 aaKnown RBP18.67■□□□□ 0.58
PSPC1-201ENST00000338910 OFCC1Q8IZS5 231 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 PPHLN1Q8NEY8 458 aaKnown RBP18.67■□□□□ 0.58
PSPC1-201ENST00000338910 FAR2Q96K12 515 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 POMKQ9H5K3 350 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 TMEM39AQ9NV64 488 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 RIC8BQ9NVN3 520 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 TBX21Q9UL17 535 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 PLXNA3P51805 1871 aa18.67■□□□□ 0.58
PSPC1-201ENST00000338910 IGLV3-10A0A075B6K4 115 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 SLC38A8A6NNN8 435 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 CFAP99D6REC4 459 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 ACOX3O15254 700 aa18.66■□□□□ 0.58
PSPC1-201ENST00000338910 RASAL1O95294 804 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms