RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PRR23BQ6ZRT6 265 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 SPATA2LQ8IUW3 424 aaPredicted RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 DCP1BQ8IZD4 617 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 CLYBLQ8N0X4 340 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 LILRA2Q8N149 483 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 MINDY1Q8N5J2 469 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 ATP6V0D2Q8N8Y2 350 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 MFSD2AQ8NA29 543 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 OR10T2Q8NGX3 314 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 HMGCLL1Q8TB92 370 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 HM13Q8TCT9 377 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 CEP295NLQ96MC4 621 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 OLFM1Q99784 485 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 CCT7Q99832 543 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 GPATCH1Q9BRR8 931 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 ERVK-6Q9BXR3 956 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 NUSAP1Q9BXS6 441 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 SHCBP1LQ9BZQ2 653 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 ZCWPW1Q9H0M4 648 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 TFB2MQ9H5Q4 396 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 INTS10Q9NVR2 710 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 TUBA8Q9NY65 449 aaPredicted RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 GTSE1Q9NYZ3 720 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 WNT16Q9UBV4 365 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 PTBP2Q9UKA9 531 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 CROTQ9UKG9 612 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 CDH7Q9ULB5 785 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 VWA7Q9Y334 891 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 MTF2Q9Y483 593 aaPredicted RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 SNX10Q9Y5X0 201 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 BACE2Q9Y5Z0 518 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 VWA8A3KMH1 1905 aa10.74□□□□□ -0.69
RTN3-201ENST00000338850 MTCL1Q9Y4B5 1905 aaKnown RBP10.74□□□□□ -0.69
RTN3-201ENST00000338850 ZNF106Q9H2Y7 1883 aaKnown RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 EME2A4GXA9 379 aaPredicted RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 TRIM64A6NGJ6 449 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 EIF4E1BA6NMX2 242 aaKnown RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 PROB1E7EW31 1015 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 ZNF701M0R085 212 aaPredicted RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 CCL16O15467 120 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 XYLBO75191 536 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 S1PR4O95977 384 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 JUNP05412 331 aaKnown RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 TFAP2AP05549 437 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 MMP2P08253 660 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 ATXN1LP0C7T5 689 aaKnown RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 ABCG1P45844 678 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 POLE2P56282 527 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 SMARCB1Q12824 385 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 PEX6Q13608 980 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 CSHL1Q14406 222 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 TRIP4Q15650 581 aaPredicted RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 FXNQ16595 210 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 RBM20Q5T481 1227 aaKnown RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 MARC1Q5VT66 337 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 TMEM198Q66K66 360 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 NXNQ6DKJ4 435 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 LCN8Q6JVE9 175 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 ANKS3Q6ZW76 656 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 RAB44Q7Z6P3 723 aaPredicted RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 CARM1Q86X55 608 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 GALNT13Q8IUC8 556 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 CCNYL1Q8N7R7 359 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 ST13P5Q8NFI4 369 aaPredicted RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 ARRDC2Q8TBH0 407 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 USP33Q8TEY7 942 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 GFM2Q969S9 779 aaKnown RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 SLC45A3Q96JT2 553 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 KLHL32Q96NJ5 620 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 PGLYRP2Q96PD5 576 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 GCNAQ96QF7 691 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 TCF12Q99081 682 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 PKP2Q99959 881 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 C19orf43Q9BQ61 176 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 TIMMDC1Q9NPL8 285 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 PFDN4Q9NQP4 134 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 TMLHEQ9NVH6 421 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 UBP1Q9NZI7 540 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 SLC2A6Q9UGQ3 507 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 VPS9D1Q9Y2B5 631 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 TRAF6Q9Y4K3 522 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 AP4S1Q9Y587 144 aa10.73□□□□□ -0.69
RTN3-201ENST00000338850 ZFP37Q9Y6Q3 630 aaPredicted RBP10.73□□□□□ -0.69
RTN3-201ENST00000338850 RIF1Q5UIP0 2472 aaKnown RBP10.72□□□□□ -0.69
RTN3-201ENST00000338850 KANSL1LA0AUZ9 987 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 E2F8A0AVK6 867 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 GOLGA8TH3BQL2 631 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 STX16-NPEPL1H3BU86 382 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 FBP2O00757 339 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 STX16O14662 325 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 MRASO14807 208 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 SYN3O14994 580 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 LDB2O43679 373 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 KLK8O60259 260 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 GFRA3O60609 400 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PMPCBO75439 489 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 GPC4O75487 556 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 NPPAP01160 153 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 PRR35P0CG20 571 aa10.72□□□□□ -0.69
RTN3-201ENST00000338850 CCDC166P0CW27 439 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms