RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 PPIDQ08752 370 aaKnown RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SLC10A2Q12908 348 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 NFATC2Q13469 925 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PDK1Q15118 436 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 QPCTQ16769 361 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SNAP47Q5SQN1 464 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 IYDQ6PHW0 289 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 WDR74Q6RFH5 385 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 BZW1Q7L1Q6 419 aaKnown RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 LYSMD3Q7Z3D4 306 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 KDELC2Q7Z4H8 507 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 NT5DC3Q86UY8 548 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 DTX1Q86Y01 620 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PHYKPLQ8IUZ5 450 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SFRP1Q8N474 314 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PQLC3Q8N755 202 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 AVL9Q8NBF6 648 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 NCSTNQ92542 709 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 RAPGEF5Q92565 580 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 EXTL1Q92935 676 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 ART4Q93070 314 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 FAF2Q96CS3 445 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 AGAP3Q96P47 875 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SRPK1Q96SB4 655 aaKnown RBP10.56□□□□□ -0.72
CAPN3-202ENST00000337571 DDA1Q9BW61 102 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SPATA16Q9BXB7 569 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PACSIN1Q9BY11 444 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 GPR63Q9BZJ6 419 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 CARD9Q9H257 536 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 PCDHGA3Q9Y5H0 932 aa10.56□□□□□ -0.72
CAPN3-202ENST00000337571 SSU72P8A0A1W2PR75 194 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 EFCAB7A8K855 629 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 ZNF487B1APH4 448 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 B4E171 279 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 DNAJC6O75061 913 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 THRAP10827 490 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 ACP5P13686 325 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 TNNT1P13805 278 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 TSPAN7P41732 249 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 MAPK9P45984 424 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 IFI35P80217 286 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 NFATC3Q12968 1075 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 SRSF6Q13247 344 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 GALNT3Q14435 633 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 IHHQ14623 411 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 PCSK7Q16549 785 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 HENMT1Q5T8I9 393 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 ZNF761Q86XN6 746 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 CPNE8Q86YQ8 564 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 RFX6Q8HWS3 928 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 RHOT2Q8IXI1 618 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 NKD1Q969G9 470 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 TEFMQ96QE5 360 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 HERPUD2Q9BSE4 406 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 ZSCAN5AQ9BUG6 496 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 BRD8Q9H0E9 1235 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 MAGEE1Q9HCI5 957 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 TRIM39Q9HCM9 518 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 SARS2Q9NP81 518 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 DDX56Q9NY93 547 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 TBC1D29Q9UFV1 150 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 CNOT6Q9ULM6 557 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 KCNK6Q9Y257 313 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 OAS3Q9Y6K5 1087 aaKnown RBP10.55□□□□□ -0.72
CAPN3-202ENST00000337571 TENM4Q6N022 2769 aa10.55□□□□□ -0.72
CAPN3-202ENST00000337571 PIEZO2Q9H5I5 2752 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 KIR2DS5A0A0G2JLQ3 304 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 A0A0G2JNG1 304 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 FADS2P1A8MWK0 482 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 GPR89AB7ZAQ6 455 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 KIR2DS3K7RE56 304 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CAPN5O15484 640 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 NUAK1O60285 661 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 MTA2O94776 668 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 EML2O95834 649 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 SLC4A1P02730 911 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 MMP2P08253 660 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 GPR89BP0CG08 455 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 F3P13726 295 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 UGT1A3P35503 534 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 EPHA4P54764 986 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CYP4F2P78329 520 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 KCNC4Q03721 635 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CDK18Q07002 472 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 KIR2DS5Q14953 304 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 TBR1Q16650 682 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 SKOR2Q2VWA4 1001 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 LINC00303Q3SY05 128 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 ZNF569Q5MCW4 686 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-202ENST00000337571 ALS2CLQ60I27 953 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CEACAM20Q6UY09 585 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 VSIG1Q86XK7 387 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 PLXDC1Q8IUK5 500 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 TRIM48Q8IWZ4 208 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 RHOT1Q8IXI2 618 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 CACNA2D3Q8IZS8 1091 aa10.54□□□□□ -0.72
CAPN3-202ENST00000337571 PLD5Q8N7P1 536 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms