RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 DTNBP1Q96EV8 351 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 SLC47A1Q96FL8 570 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 DNAJB4Q9UDY4 337 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 NFS1Q9Y697 457 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 KCNE2Q9Y6J6 123 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ANXA6P08133 673 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 NTSP30990 170 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 CDH5P33151 784 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 SOX6P35712 828 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 RPIAP49247 311 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 SEC13P55735 322 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TAF1AQ15573 450 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 NAIF1Q69YI7 327 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 RNF19BQ6ZMZ0 732 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 HOMEZQ8IX15 550 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 SMG8Q8ND04 991 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ASZ1Q8WWH4 475 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 CXorf40BQ96DE9 158 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ITCHQ96J02 903 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 EPHX1P07099 455 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 SLC35G4P0C7Q5 338 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 PABPC1P11940 636 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 CYP4B1P13584 511 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ATP6V1C1P21283 382 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 KHDC1Q4VXA5 237 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 PIM3Q86V86 326 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 KREMEN2Q8NCW0 462 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 CDK15Q96Q40 435 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 DEC1Q9P2X7 70 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TRBV23OR9-2A0A075B6M9 112 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SNTNA6NMZ2 147 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 DYRK3O43781 588 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CDK14O94921 469 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 ZNF37AP17032 561 aaPredicted RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 AQP1P29972 269 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 IL23RQ5VWK5 629 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SPATA19Q7Z5L4 167 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CFAP206Q8IYR0 622 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 KIAA2013Q8IYS2 634 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CPSF7Q8N684 471 aaKnown RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 AHCYL2Q96HN2 611 aaKnown RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 OSBPL2Q9H1P3 480 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 LRTM1Q9HBL6 345 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CLIC5Q9NZA1 410 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 VPS4AQ9UN37 437 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 AP4B1Q9Y6B7 739 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 ERAL1O75616 437 aaKnown RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 TCEA3O75764 348 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CNTN5O94779 1100 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SLC11A1P49279 550 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 BNIP2Q12982 314 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 TRIM32Q13049 653 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 TXNDC8Q6A555 127 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 RORBQ92753 470 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 COL2A1P02458 1487 aaPredicted RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 FAM159BA6NKW6 160 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 QSOX1O00391 747 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SNAP91O60641 907 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 BCL10O95999 233 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 NOS3P29474 1203 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 NAE1Q13564 534 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 PRKD1Q15139 912 aaPredicted RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 GPAT3Q53EU6 434 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 PLEKHG4Q58EX7 1191 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 GPRIN1Q7Z2K8 1008 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SAPCD2Q86UD0 394 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CAPN8A6NHC0 703 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 NAA20P61599 178 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 TMEM198Q66K66 360 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 C15orf39Q6ZRI6 1047 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CCDC28BQ9BUN5 200 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 EBPLQ9BY08 206 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 FETUBQ9UGM5 382 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 ADGRE2Q9UHX3 823 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 KCTD3Q9Y597 815 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 GSAPA4D1B5 854 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 WFS1O76024 890 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 SERPINB1P30740 379 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CAPZA2P47755 286 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 ZNF605Q86T29 641 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CCDC103Q8IW40 242 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 RGL4Q8IZJ4 473 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 PQLC1Q8N2U9 271 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 NPY6RQ99463 290 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 C6orf62Q9GZU0 229 aaPredicted RBP12.92□□□□□ -0.34
VSTM4-202ENST00000332853 MIR1-1HGQ9H1L0 117 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 CNTN6Q9UQ52 1028 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 COL18A1P39060 1754 aa12.92□□□□□ -0.34
VSTM4-202ENST00000332853 A0A1W2PQ67 120 aa12.91□□□□□ -0.34
VSTM4-202ENST00000332853 H3BM21 787 aa12.91□□□□□ -0.34
VSTM4-202ENST00000332853 EFCAB14O75071 495 aa12.91□□□□□ -0.34
VSTM4-202ENST00000332853 ATG13O75143 517 aa12.91□□□□□ -0.34
VSTM4-202ENST00000332853 UGT1A6P19224 532 aa12.91□□□□□ -0.34
VSTM4-202ENST00000332853 UGT1A1P22309 533 aa12.91□□□□□ -0.34
VSTM4-202ENST00000332853 UGT1A4P22310 534 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms