RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 KBTBD8Q8NFY9 601 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 FAM110BQ8TC76 370 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 RPL3LQ92901 407 aaKnown RBP8.34□□□□□ -1.07
SKA2-201ENST00000330137 TMBIM1Q969X1 311 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 BIRC7Q96CA5 298 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CPB2Q96IY4 423 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 NSMCE2Q96MF7 247 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 MBOAT4Q96T53 435 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 TEX13BQ9BXU2 312 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 C2orf40Q9H1Z8 148 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 ZNF556Q9HAH1 456 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 CHRAC1Q9NRG0 131 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 FBXL12Q9NXK8 326 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 PCDHGB6Q9Y5F9 930 aa8.34□□□□□ -1.07
SKA2-201ENST00000330137 FAM92AA1XBS5 289 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 EFCAB9A8MZ26 197 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 H3BMM5 538 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TLL1O43897 1013 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 EEDO75530 441 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 STBD1O95210 358 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 IL1RNP18510 177 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SDC4P31431 198 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PTGS2P35354 604 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 MLLT3P42568 568 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 C1QTNF8P60827 252 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 VBP1P61758 197 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PTPN11Q06124 597 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 IFRD2Q12894 506 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 CDK5R2Q13319 367 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 ZNF699Q32M78 642 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PARP15Q460N3 678 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TJAP1Q5JTD0 557 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LAIR2Q6ISS4 152 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 BLOC1S3Q6QNY0 202 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 OTOP3Q7RTS5 596 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SPATA19Q7Z5L4 167 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 KCTD20Q7Z5Y7 419 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PARP16Q8N5Y8 322 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CCNYL1Q8N7R7 359 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CENPIQ92674 756 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 SLC38A4Q969I6 547 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 L3HYPDHQ96EM0 354 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CCDC115Q96NT0 180 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 DCSTAMPQ9H295 470 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 KCNN2Q9H2S1 579 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 POMKQ9H5K3 350 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SLC52A3Q9NQ40 469 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 C12orf4Q9NQ89 552 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 EGFL7Q9UHF1 273 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 KLHL21Q9UJP4 597 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SLC39A10Q9ULF5 831 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.33□□□□□ -1.08
SKA2-201ENST00000330137 BTBD3Q9Y2F9 522 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 AP3M1Q9Y2T2 418 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GPSM3Q9Y4H4 160 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 AUP1Q9Y679 476 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LRRC37AA6NMS7 1700 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 FNDC1Q4ZHG4 1894 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 COL11A2P13942 1736 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 LTBP1Q14766 1721 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TMCC2O75069 709 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 MICAL2O94851 1124 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SLITRK5O94991 958 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GSTM1P09488 218 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CD19P15391 556 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 SPNP16150 400 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 IL7RP16871 459 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TIE1P35590 1138 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 NFKB2Q00653 900 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 POU4F1Q01851 419 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GBE1Q04446 702 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 EMX2Q04743 252 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LIPEQ05469 1076 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CHRNB3Q05901 458 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GRM3Q14832 879 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 MEP1AQ16819 746 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CTU2Q2VPK5 515 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 TMEM236Q5W0B7 351 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 NCBP2-AS2Q69YL0 99 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 STYK1Q6J9G0 422 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 ZNF517Q6ZMY9 492 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 LHFPL5Q8TAF8 219 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 C19orf60Q96EN9 201 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 LRRC3Q9BY71 257 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 NUAK2Q9H093 628 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 XYLT2Q9H1B5 865 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GORASP2Q9H8Y8 452 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 CAB39LQ9H9S4 337 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 GBA2Q9HCG7 927 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 COMMD8Q9NX08 183 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 PAQR5Q9NXK6 330 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 TAS2R9Q9NYW1 312 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 MAGED2Q9UNF1 606 aaPredicted RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 USP22Q9UPT9 525 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 ORC6Q9Y5N6 252 aa8.33□□□□□ -1.08
SKA2-201ENST00000330137 OAS3Q9Y6K5 1087 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 BRCA1P38398 1863 aaKnown RBP8.33□□□□□ -1.08
SKA2-201ENST00000330137 K7ERI5 159 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms