RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 RAD1O60671 282 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 SNX2O60749 519 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 MX2P20592 715 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 CA4P22748 312 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 MC2RQ01718 297 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 ZBTB17Q13105 803 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 ATG14Q6ZNE5 492 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 LYSMD3Q7Z3D4 306 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 MAP7D3Q8IWC1 876 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 COL26A1Q96A83 441 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 HDAC11Q96DB2 347 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 ZMYND15Q9H091 742 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 SLC25A18Q9H1K4 315 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 PRDM8Q9NQV8 689 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 ATXN10Q9UBB4 475 aa17.27■□□□□ 0.36
EXOSC4-201ENST00000316052 RGSL1A5PLK6 1076 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 NKX2-8O15522 239 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 GRID2O43424 1007 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 NUAK1O60285 661 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 KRT7P08729 469 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 F3P13726 295 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 ZNF8P17098 575 aaPredicted RBP17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 KDELR1P24390 212 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 RAB15P59190 212 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 GALNT3Q14435 633 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 BORAQ6PGQ7 559 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 TIPARPQ7Z3E1 657 aaKnown RBP17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 PLD5Q8N7P1 536 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 CCHCR1Q8TD31 782 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 RNF157Q96PX1 679 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 TBC1D10AQ9BXI6 508 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 OR2AG1Q9H205 316 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 RMI1Q9H9A7 625 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 APMAPQ9HDC9 416 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 HAUS2Q9NVX0 235 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 PKD2L2Q9NZM6 624 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 UVRAGQ9P2Y5 699 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 CPNE7Q9UBL6 633 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 ADGRG1Q9Y653 693 aa17.26■□□□□ 0.35
EXOSC4-201ENST00000316052 LRRK2Q5S007 2527 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 SYCE3A1L190 88 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 PPFIA2O75334 1257 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 CASP14P31944 242 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 MAPK9P45984 424 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 IFI35P80217 286 aaPredicted RBP17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 PPIDQ08752 370 aaKnown RBP17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 KDELC2Q7Z4H8 507 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC9B2Q86UD5 537 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 UNC5BQ8IZJ1 945 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 SH3KBP1Q96B97 665 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 TRIB3Q96RU7 358 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 HERPUD2Q9BSE4 406 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 CEP41Q9BYV8 373 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 BRD8Q9H0E9 1235 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 CARD9Q9H257 536 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 FBXO8Q9NRD0 319 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 IFNKQ9P0W0 207 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 SCHIP1Q9P0W5 487 aaPredicted RBP17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC23A2Q9UGH3 650 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 KLHL3Q9UH77 587 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 SHOC2Q9UQ13 582 aa17.25■□□□□ 0.35
EXOSC4-201ENST00000316052 LOC101059948A0A1B0GTJ6 334 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 H2AFZP0C0S5 128 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 PIRTP0C851 137 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 HNRNPH3P31942 346 aaKnown RBP17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 EPHA4P54764 986 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 POLE2P56282 527 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 UBE2IP63279 158 aaKnown RBP17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 ALS2CLQ60I27 953 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 H2AFVQ71UI9 128 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 ADGRG6Q86SQ4 1221 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 NLGN4XQ8N0W4 816 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 NLGN4YQ8NFZ3 816 aaPredicted RBP17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 IQCDQ96DY2 449 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC45A3Q96JT2 553 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 PLEKHG4BQ96PX9 1271 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 TEFMQ96QE5 360 aaKnown RBP17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 SPATA16Q9BXB7 569 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 ADGRE3Q9BY15 652 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 ADNPQ9H2P0 1102 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 ZFYVE1Q9HBF4 777 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 TRIM39Q9HCM9 518 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 KLC4Q9NSK0 619 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 HEY1Q9Y5J3 304 aa17.24■□□□□ 0.35
EXOSC4-201ENST00000316052 KIR2DS5A0A0G2JLQ3 304 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 A0A0G2JNG1 304 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 C3orf70A6NLC5 250 aaPredicted RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 KIR2DS3K7RE56 304 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 ARHGAP6O43182 974 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC25A14O95258 325 aaPredicted RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 MAN1A1P33908 653 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 CLCNKAP51800 687 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 TPM4P67936 248 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 MESDQ14696 234 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 KIR2DS5Q14953 304 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 SLC18A3Q16572 532 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 ASTE1Q2TB18 679 aaPredicted RBP17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 ZFYVE27Q5T4F4 411 aa17.23■□□□□ 0.35
EXOSC4-201ENST00000316052 CEACAM20Q6UY09 585 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms