RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 CAPN14A8MX76 684 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 PRRT4C9JH25 899 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 DIAPH2O60879 1101 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 TSPAN12O95859 305 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 SERPINB5P36952 375 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 POLR2LP62875 67 aaKnown RBP22.12■■□□□ 1.13
SMAD1-201ENST00000302085 HYAL1Q12794 435 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 BRAT1Q6PJG6 821 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 TREML1Q86YW5 311 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 NKAPQ8N5F7 415 aaKnown RBP22.12■■□□□ 1.13
SMAD1-201ENST00000302085 OBP2AQ9NY56 170 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 SLC8A2Q9UPR5 921 aa22.12■■□□□ 1.13
SMAD1-201ENST00000302085 ZNF106Q9H2Y7 1883 aaKnown RBP22.11■■□□□ 1.13
SMAD1-201ENST00000302085 C1SP09871 688 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 TPBGLP0DKB5 382 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 MTHFD2P13995 350 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 HNRNPLP14866 589 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMAD1-201ENST00000302085 RPS3P23396 243 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMAD1-201ENST00000302085 ACRV1P26436 265 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 CLCN7P51798 805 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 ATP6V0D1P61421 351 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 SLC9B1Q4ZJI4 515 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 RPS27LQ71UM5 84 aaKnown RBP22.11■■□□□ 1.13
SMAD1-201ENST00000302085 ZNF366Q8N895 744 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 KDM1BQ8NB78 822 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 NAT14Q8WUY8 206 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 TUBB6Q9BUF5 446 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 CCDC106Q9BWC9 280 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 LRMDAQ9H2I8 198 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 HPS4Q9NQG7 708 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 PCDHB1Q9Y5F3 818 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 PRSS21Q9Y6M0 314 aa22.11■■□□□ 1.13
SMAD1-201ENST00000302085 GOLGA8CPA6NN73 597 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 UBXN8O00124 270 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 SMIM24O75264 130 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 TIMP2P16035 220 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 ZNF7P17097 686 aaPredicted RBP22.1■■□□□ 1.13
SMAD1-201ENST00000302085 PPARGP37231 505 aaPredicted RBP22.1■■□□□ 1.13
SMAD1-201ENST00000302085 HK2P52789 917 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 NFKB2Q00653 900 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 GPR33Q49SQ1 333 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 LYPLAL1Q5VWZ2 237 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 ANKRD54Q6NXT1 300 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 RBFAQ8N0V3 343 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 EEF1AKMT1Q8WVE0 214 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 EXT2Q93063 718 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 L3HYPDHQ96EM0 354 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 IL36AQ9UHA7 158 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 TSPAN11A1L157 253 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 AGAP14A8MT82 685 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 CDC7O00311 574 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 HDAC3O15379 428 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 RASSF9O75901 435 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 UNC50Q53HI1 259 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 ZNF678Q5SXM1 525 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 FBXW10Q5XX13 1052 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 STAG3L4Q8TBR4 150 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 INPP5DQ92835 1189 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 PBXIP1Q96AQ6 731 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 TTC1Q99614 292 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 CLPBQ9H078 707 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 GSTO2Q9H4Y5 243 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 SARS2Q9NP81 518 aaKnown RBP22.1■■□□□ 1.13
SMAD1-201ENST00000302085 THG1LQ9NWX6 298 aaKnown RBP22.1■■□□□ 1.13
SMAD1-201ENST00000302085 LNPEPQ9UIQ6 1025 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 CRLS1Q9UJA2 301 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 DHRS7Q9Y394 339 aa22.1■■□□□ 1.13
SMAD1-201ENST00000302085 TRANK1O15050 2925 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 E5RI56 91 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 SNUPNO95149 360 aaKnown RBP22.09■■□□□ 1.13
SMAD1-201ENST00000302085 IL2P60568 153 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 UBAP2LQ14157 1087 aaKnown RBP22.09■■□□□ 1.13
SMAD1-201ENST00000302085 PDGFRLQ15198 375 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 TSNQ15631 228 aaKnown RBP22.09■■□□□ 1.13
SMAD1-201ENST00000302085 SEL1L3Q68CR1 1132 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 VITQ6UXI7 678 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 NXPE1Q8N323 547 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 PPP2R3CQ969Q6 453 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 DEC1Q9P2X7 70 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 CDH7Q9ULB5 785 aa22.09■■□□□ 1.13
SMAD1-201ENST00000302085 KERAO60938 352 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 PTRHD1Q6GMV3 140 aaKnown RBP22.08■■□□□ 1.13
SMAD1-201ENST00000302085 UGT3A1Q6NUS8 523 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 FRMD7Q6ZUT3 714 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 CPNE9Q8IYJ1 553 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 CLDN19Q8N6F1 224 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 PTGR2Q8N8N7 351 aaPredicted RBP22.08■■□□□ 1.13
SMAD1-201ENST00000302085 LINGO1Q96FE5 620 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 ZFP14Q9HCL3 533 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 TNFRSF12AQ9NP84 129 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 VTI1BQ9UEU0 232 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 PLA2G4CQ9UP65 541 aa22.08■■□□□ 1.13
SMAD1-201ENST00000302085 NPEPPSL1A6NEC2 478 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 KRT16P08779 473 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 SPINT3P49223 89 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 ST8SIA6P61647 398 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 HERVK_113P63132 956 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 ZNF805Q5CZA5 627 aa22.08■■□□□ 1.12
SMAD1-201ENST00000302085 FUBP1Q96AE4 644 aaKnown RBP22.08■■□□□ 1.12
SMAD1-201ENST00000302085 OR52B2Q96RD2 323 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms