RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 MAGEH1Q9H213 219 aa13.6□□□□□ -0.23
NCSTN-201ENST00000294785 SMOXQ9NWM0 555 aa13.6□□□□□ -0.23
NCSTN-201ENST00000294785 GMPR2Q9P2T1 348 aaKnown RBP13.6□□□□□ -0.23
NCSTN-201ENST00000294785 GIMAP2Q9UG22 337 aa13.6□□□□□ -0.23
NCSTN-201ENST00000294785 SEPT3Q9UH03 358 aa13.6□□□□□ -0.23
NCSTN-201ENST00000294785 EGFL7Q9UHF1 273 aa13.6□□□□□ -0.23
NCSTN-201ENST00000294785 LEF1Q9UJU2 399 aaPredicted RBP13.6□□□□□ -0.23
NCSTN-201ENST00000294785 OAS3Q9Y6K5 1087 aaKnown RBP13.6□□□□□ -0.23
NCSTN-201ENST00000294785 GREB1Q4ZG55 1949 aa13.6□□□□□ -0.23
NCSTN-201ENST00000294785 SLC12A8A0AV02 714 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 SAC3D1A6NKF1 404 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 ECI2O75521 394 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 CDK4P11802 303 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 NFYCQ13952 458 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 CAPRIN1Q14444 709 aaKnown RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 PTPRCAPQ14761 206 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 PRR23BQ6ZRT6 265 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 ZIM2Q9NZV7 527 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 HSFX1Q9UBD0 423 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 BTRCQ9Y297 605 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 MED16Q9Y2X0 877 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 RNF103-CHMP3A0A140T963 221 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 PLOD2O00469 737 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 NDUFS3O75489 264 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 TBX18O95935 607 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 TACR2P21452 398 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 DCTN2Q13561 401 aaKnown RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 SETMARQ53H47 684 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 VARS2Q5ST30 1063 aaKnown RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 MFSD14CQ5VZR4 134 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 TTC33Q6PID6 262 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 CIR1Q86X95 450 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 ZNF280BQ86YH2 543 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 TBC1D21Q8IYX1 336 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 FUBP1Q96AE4 644 aaKnown RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 PSKH2Q96QS6 385 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 ZFYVE28Q9HCC9 887 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 SEMA4BQ9NPR2 832 aaPredicted RBP13.59□□□□□ -0.23
NCSTN-201ENST00000294785 RIC8BQ9NVN3 520 aa13.59□□□□□ -0.23
NCSTN-201ENST00000294785 OR6C75A6NL08 312 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 C2orf81A6NN90 581 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 F5H5T6 163 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 GIPC1O14908 333 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 B4GALT3O60512 393 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 SNAP91O60641 907 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 GJB3O75712 270 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 CES1P23141 567 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 TTKP33981 857 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 GSK3BP49841 420 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 ERVK-8P63133 956 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 TSNQ15631 228 aaKnown RBP13.58□□□□□ -0.24
NCSTN-201ENST00000294785 FXNQ16595 210 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 CMTR2Q8IYT2 770 aaKnown RBP13.58□□□□□ -0.24
NCSTN-201ENST00000294785 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 OR56A4Q8NGH8 313 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
NCSTN-201ENST00000294785 SPATA17Q96L03 361 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 KCTD14Q9BQ13 255 aaPredicted RBP13.58□□□□□ -0.24
NCSTN-201ENST00000294785 PCTPQ9UKL6 214 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 TCRBV5S2A0A599 114 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 CCDC154A6NI56 674 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 SNX2O60749 519 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 ADAMTS4O75173 837 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 VPS26AO75436 327 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 SLC22A3O75751 556 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 ASGR1P07306 291 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 FMO4P31512 558 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 RFC2P35250 354 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 DIO3P55073 304 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 ZBED5Q49AG3 693 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 FAM219BQ5XKK7 198 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 DHRS4L2Q6PKH6 230 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 GLT6D1Q7Z4J2 308 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 GPR141Q7Z602 305 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 PROSER1Q86XN7 944 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 SUN2Q9UH99 717 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 COMMD10Q9Y6G5 202 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 VWA8A3KMH1 1905 aa13.58□□□□□ -0.24
NCSTN-201ENST00000294785 SEPT4O43236 478 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 HOXD9P28356 352 aaPredicted RBP13.57□□□□□ -0.24
NCSTN-201ENST00000294785 HTR1EP28566 365 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 OXTRP30559 389 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 OR1G1P47890 313 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 ZFP36L2P47974 494 aaKnown RBP13.57□□□□□ -0.24
NCSTN-201ENST00000294785 NUP107P57740 925 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 TAF10Q12962 218 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 CTXN3Q4LDR2 81 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 NADSYN1Q6IA69 706 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 FAM110BQ8TC76 370 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 GAB3Q8WWW8 586 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 TMIGD2Q96BF3 282 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 ANAPC2Q9UJX6 822 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 OAZ3Q9UMX2 235 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 FAM234BA2RU67 622 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 ACOX3O15254 700 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 HMBSP08397 361 aa13.57□□□□□ -0.24
NCSTN-201ENST00000294785 ENO2P09104 434 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms