RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 MARC1Q5VT66 337 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 CDKAL1Q5VV42 579 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 TMCO3Q6UWJ1 677 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 LYSMD3Q7Z3D4 306 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 NLRP8Q86W28 1048 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 RASGRP3Q8IV61 690 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 ATPAF2Q8N5M1 289 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 NEK11Q8NG66 645 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 EPB41L1Q9H4G0 881 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 NT5MQ9NPB1 228 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 PARVAQ9NVD7 372 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 OGFRQ9NZT2 677 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 KCND3Q9UK17 655 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 CNOT6Q9ULM6 557 aaKnown RBP10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 SLC30A1Q9Y6M5 507 aa10.61□□□□□ -0.71
NSMCE2-201ENST00000287437 A0A0J9YYE9 177 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 TMEM191CA6NGB0 347 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 FADS2P1A8MWK0 482 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 H3BRJ5 948 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 LRCH4O75427 683 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 RASSF9O75901 435 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 RNF8O76064 485 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 UBXN7O94888 489 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 CLDN7O95471 211 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 TRBC1P01850 177 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 ZNF135P52742 658 aaPredicted RBP10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 EPHB1P54762 984 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 UBE2IP63279 158 aaKnown RBP10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 ITKQ08881 620 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 DNASE1L3Q13609 305 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 IHHQ14623 411 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 SMTNL2Q2TAL5 461 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 NADK2Q4G0N4 442 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 CPZQ66K79 652 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 ZNF787Q6DD87 383 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 PLEKHA7Q6IQ23 1121 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 PHYKPLQ8IUZ5 450 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 PSTKQ8IV42 348 aaKnown RBP10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 APLFQ8IW19 511 aaPredicted RBP10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 NDUFAF2Q8N183 169 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 CT55Q8WUE5 264 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 PLEKHG4BQ96PX9 1271 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 WDR24Q96S15 920 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 RUFY1Q96T51 708 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 OSGEPL1Q9H4B0 414 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 ZNF768Q9H5H4 540 aaKnown RBP10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 ARFGAP3Q9NP61 516 aa10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 SCHIP1Q9P0W5 487 aaPredicted RBP10.6□□□□□ -0.71
NSMCE2-201ENST00000287437 OR5K4A6NMS3 321 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 GRID2O43424 1007 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 KIF1CO43896 1103 aaKnown RBP10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 SPAG6O75602 509 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 TIAF1O95411 115 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 TCF4P15884 667 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 COL8A1P27658 744 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 IL1R2P27930 398 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 ARL4AP40617 200 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 GARSP41250 739 aaKnown RBP10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 PGDP52209 483 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CDH6P55285 790 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CHAF1BQ13112 559 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 SEMA5AQ13591 1074 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 IL11RAQ14626 422 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 DPYSL2Q16555 572 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 ZNF648Q5T619 568 aaPredicted RBP10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 TMEM26Q6ZUK4 368 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 POLNQ7Z5Q5 900 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 AVL9Q8NBF6 648 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 HSPH1Q92598 858 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CSPG4P5Q96PW8 444 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 ACTL8Q9H568 366 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 RMI1Q9H9A7 625 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 LHX9Q9NQ69 397 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CASS4Q9NQ75 786 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CUEDC1Q9NWM3 386 aaPredicted RBP10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 PADI1Q9ULC6 663 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 CHKBQ9Y259 395 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 MAP4K5Q9Y4K4 846 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 PCDHGA6Q9Y5G7 932 aa10.59□□□□□ -0.71
NSMCE2-201ENST00000287437 C1orf232A0A0U1RR37 186 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 GOLGA6L3A6NEY3 463 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 TOX3O15405 576 aaPredicted RBP10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 NUAK1O60285 661 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 SORBS2O94875 1100 aaKnown RBP10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 PRLP01236 227 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 VIPP01282 170 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 FGF5P12034 268 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 FERP16591 822 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 ZNF8P17098 575 aaPredicted RBP10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 AMD1P17707 334 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 RPS18P62269 152 aaKnown RBP10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 DSC2Q02487 901 aa10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 SEPT7Q16181 437 aaKnown RBP10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 EIF2S3LQ2VIR3 472 aaKnown RBP10.58□□□□□ -0.72
NSMCE2-201ENST00000287437 PLA2G4EQ3MJ16 856 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms