RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 PRAMEF10O60809 474 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 ASMTLO95671 621 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 EML2O95834 649 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 CCL4P13236 92 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 ZFXP17010 805 aaPredicted RBP9.64□□□□□ -0.87
VPS41-201ENST00000265745 ETV5P41161 510 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 FASLGP48023 281 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 ATP1A2P50993 1020 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 LIMK2P53671 638 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 CFHR1Q03591 330 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 TBX2Q13207 712 aaPredicted RBP9.64□□□□□ -0.87
VPS41-201ENST00000265745 BIRC2Q13490 618 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 C16orf72Q14CZ0 275 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 TGIF1Q15583 401 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 TAF1BQ53T94 588 aaPredicted RBP9.64□□□□□ -0.87
VPS41-201ENST00000265745 NKAIN2Q5VXU1 208 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 MFSD7Q6UXD7 560 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 NPNTQ6UXI9 565 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 KDELC2Q7Z4H8 507 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 TMC3Q7Z5M5 1100 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 NT5DC3Q86UY8 548 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 CNGA4Q8IV77 575 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 RHOT1Q8IXI2 618 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 ZNF843Q8N446 348 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 SFRP1Q8N474 314 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 RNF214Q8ND24 703 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 OR4D9Q8NGE8 314 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 USP7Q93009 1102 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 AGAP3Q96P47 875 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 CEP41Q9BYV8 373 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 SLC25A51Q9H1U9 297 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 TSPY26PQ9H489 355 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 RMI1Q9H9A7 625 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 ZFYVE1Q9HBF4 777 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 MAGEE1Q9HCI5 957 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 PKD2L2Q9NZM6 624 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 FOXJ2Q9P0K8 574 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 PRKAB1Q9Y478 270 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 HYOU1Q9Y4L1 999 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 MYLKQ15746 1914 aa9.64□□□□□ -0.87
VPS41-201ENST00000265745 TRBV23OR9-2A0A075B6M9 112 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 AKR1B15C9JRZ8 316 aaPredicted RBP9.63□□□□□ -0.87
VPS41-201ENST00000265745 KALRNO60229 2985 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 KRT1P04264 644 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 LIPCP11150 499 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 COMTP21964 271 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 CDKN2BP42772 138 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 NR2C2P49116 596 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 MAPK10P53779 464 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 GPLD1P80108 840 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 CDK18Q07002 472 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 TRA2AQ13595 282 aaKnown RBP eCLIP9.63□□□□□ -0.87
VPS41-201ENST00000265745 GALNT3Q14435 633 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 TAZQ16635 292 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 SWI5Q1ZZU3 235 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 TEX44Q53QW1 395 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.63□□□□□ -0.87
VPS41-201ENST00000265745 KIAA1614Q5VZ46 1190 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 IYDQ6PHW0 289 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 B4GALNT4Q76KP1 1039 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 CHST15Q7LFX5 561 aaPredicted RBP9.63□□□□□ -0.87
VPS41-201ENST00000265745 LYSMD3Q7Z3D4 306 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 ZFAND4Q86XD8 727 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 DTX1Q86Y01 620 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 RFX6Q8HWS3 928 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 RCBTB1Q8NDN9 531 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 GPR26Q8NDV2 337 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 SPATA22Q8NHS9 363 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 DDX56Q9NY93 547 aaKnown RBP9.63□□□□□ -0.87
VPS41-201ENST00000265745 KCNK4Q9NYG8 393 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 AKAP7Q9P0M2 348 aaPredicted RBP9.63□□□□□ -0.87
VPS41-201ENST00000265745 SEPT10Q9P0V9 454 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 PDP2Q9P2J9 529 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 SAE1Q9UBE0 346 aaPredicted RBP9.63□□□□□ -0.87
VPS41-201ENST00000265745 TBC1D29Q9UFV1 150 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 SHOC2Q9UQ13 582 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 ALG6Q9Y672 507 aa9.63□□□□□ -0.87
VPS41-201ENST00000265745 A6NCN8 305 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 PPP1R12AO14974 1030 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 GRID2O43424 1007 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 SPOPO43791 374 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 NUAK1O60285 661 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 MT-CYBP00156 380 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 PIRTP0C851 137 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 THRAP10827 490 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 FGF3P11487 239 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 TNNT1P13805 278 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 ZNF8P17098 575 aaPredicted RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 MPSTP25325 297 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 PTPN3P26045 913 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 CD82P27701 267 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 CSF2RBP32927 897 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 NOP2P46087 812 aaKnown RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 SERPINB4P48594 390 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 HADHBP55084 474 aaKnown RBP9.62□□□□□ -0.87
VPS41-201ENST00000265745 DCDC1P59894 354 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 DYNLT1P63172 113 aa9.62□□□□□ -0.87
VPS41-201ENST00000265745 SRSF6Q13247 344 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms