RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CAPNS1P04632 268 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 GRK4P32298 578 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 POLR2IP36954 125 aaKnown RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CDKN1CP49918 316 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 PERM1Q5SV97 790 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ANKS6Q68DC2 871 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ANKRD34AQ69YU3 496 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 PRMT9Q6P2P2 845 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 ITIH5Q86UX2 942 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 SNX29P2Q8IUI4 249 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 CROCCP3Q8IVE0 287 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 TMEM125Q96AQ2 219 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 BIRC7Q96CA5 298 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 FEM1CQ96JP0 617 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 UHRF1Q96T88 793 aaPredicted RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 GPR21Q99679 349 aa12.32□□□□□ -0.44
CHMP3-201ENST00000263856 EIF2B4Q9UI10 523 aaKnown RBP12.32□□□□□ -0.44
CHMP3-201ENST00000263856 RALGAPA2Q2PPJ7 1873 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 GSTA4O15217 222 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 CACNG3O60359 315 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 NDUFS3O75489 264 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 RASAL1O95294 804 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 IDO1P14902 403 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ALDH4A1P30038 563 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 RFC2P35250 354 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 CCL14Q16627 93 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 FSCN1Q16658 493 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 SGO1Q5FBB7 561 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 INTS11Q5TA45 600 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 IQSEC1Q6DN90 963 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 LIMS2Q7Z4I7 341 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 DCP1BQ8IZD4 617 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ZUFSPQ96AP4 578 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 AP5M1Q9H0R1 490 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 SMURF2Q9HAU4 748 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 FAIMQ9NVQ4 179 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 OSER1Q9NX31 292 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 IKZF3Q9UKT9 509 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF510Q9Y2H8 683 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 SH3GLB1Q9Y371 365 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 NUP214P35658 2090 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 GPR39O43194 453 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ECI2O75521 394 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 SLC22A3O75751 556 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ITGB6P18564 788 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 CCNA2P20248 432 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 MAGEA10P43363 369 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 POLR2JP52435 117 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 TNK2Q07912 1038 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 PTPRRQ15256 657 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ATP6AP1LQ52LC2 224 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 CYBRD1Q53TN4 286 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 LCN8Q6JVE9 175 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 KIAA2013Q8IYS2 634 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 NCLNQ969V3 563 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 IMP4Q96G21 291 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 GPATCH1Q9BRR8 931 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 NOL6Q9H6R4 1146 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 POLR3BQ9NW08 1133 aaPredicted RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 NYNRINQ9P2P1 1898 aaKnown RBP12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ZNF236Q9UL36 1845 aa12.31□□□□□ -0.44
CHMP3-201ENST00000263856 ACOX3O15254 700 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SLC7A4O43246 635 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 IMPDH2P12268 514 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 MTHFD2P13995 350 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 OR1E1P30953 314 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SHMT2P34897 504 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 TBX4P57082 545 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SELPLGQ14242 412 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 XKR4Q5GH76 650 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 BRMS1LQ5PSV4 323 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 NANOGP8Q6NSW7 305 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 ABI1Q8IZP0 508 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 MINDY1Q8N5J2 469 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SLC15A4Q8N697 577 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 TMCO5AQ8N6Q1 288 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 MFSD2AQ8NA29 543 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 OR4L1Q8NH43 312 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 ITFG1Q8TB96 612 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 TBC1D15Q8TC07 691 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 BORCS5Q969J3 196 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SDCCAG3Q96C92 435 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 L3HYPDHQ96EM0 354 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 MFSD1Q9H3U5 465 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 NANOGQ9H9S0 305 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 MRM3Q9HC36 420 aaKnown RBP12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PCDH12Q9NPG4 1184 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 ZMYM5Q9UJ78 669 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 COQ6Q9Y2Z9 468 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 SNAP91O60641 907 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 XYLBO75191 536 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 E2F6O75461 281 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 BMXP51813 675 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 LCP2Q13094 533 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 NR6A1Q15406 480 aa12.3□□□□□ -0.44
CHMP3-201ENST00000263856 PTPRNQ16849 979 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms