RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SNTA1Q13424 505 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TUBB3Q13509 450 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 FRG1Q14331 258 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SNAPC1Q16533 368 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SUPT20HL1Q3ZLR7 823 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TPRG1LQ5T0D9 272 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 KYAT3Q6YP21 454 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ASRGL1Q7L266 308 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 TMPRSS9Q7Z410 1059 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 GALNTL5Q7Z4T8 443 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PRSS42Q7Z5A4 293 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PDZD9Q8IXQ8 264 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RCOR2Q8IZ40 523 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 KDM1BQ8NB78 822 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 EEF1AKMT1Q8WVE0 214 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RBPMSQ93062 196 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RAD51AP1Q96B01 352 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 AP2M1Q96CW1 435 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 KAZALD1Q96I82 304 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CMTM3Q96MX0 182 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 C14orf105Q9NVL8 296 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 VAPAQ9P0L0 249 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PNMA8BQ9ULN7 279 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PPM1HQ9ULR3 514 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RPH3ALQ9UNE2 315 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SALL3Q9BXA9 1300 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 A0A0A6YYH2 397 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 A6NJ64 397 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 DNAJB6O75190 326 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 SRGNP10124 158 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CSKP41240 450 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 GABREP78334 506 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 POU4F1Q01851 419 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 ORC2Q13416 577 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PKN2Q16513 984 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 DDR2Q16832 855 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 WSCD2Q2TBF2 565 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RFX4Q33E94 735 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RNF219Q5W0B1 726 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 NSMFQ6X4W1 530 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 RAB44Q7Z6P3 723 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 OR2L8Q8NGY9 312 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 HUS1BQ8NHY5 278 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 POM121Q96HA1 1249 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 GPN1Q9HCN4 374 aaPredicted RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 PTPRHQ9HD43 1115 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CD320Q9NPF0 282 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 EBF1Q9UH73 591 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CDH9Q9ULB4 789 aa6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 FARSAQ9Y285 508 aaKnown RBP6.72□□□□□ -1.33
PDGFRA-201ENST00000257290 CAMTA1Q9Y6Y1 1673 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 CHD2O14647 1828 aaKnown RBP6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 L7N2F9 121 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 HTR2AP28223 471 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 TYK2P29597 1187 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 TECP42680 631 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 ACY1Q03154 408 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 RHEBQ15382 184 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 CFAP206Q8IYR0 622 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 ADAM32Q8TC27 787 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 UFD1Q92890 307 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 RBM18Q96H35 190 aaKnown RBP6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 PIP5K1AQ99755 562 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 ILKAPQ9H0C8 392 aaPredicted RBP6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 IL1RL2Q9HB29 575 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 SPON1Q9HCB6 807 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 EXTL2Q9UBQ6 330 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 NDRG3Q9UGV2 375 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 LMO7Q8WWI1 1683 aa6.71□□□□□ -1.33
PDGFRA-201ENST00000257290 NEMP1O14524 444 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SLC22A2O15244 555 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SNRPD2P62316 118 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 NFATC3Q12968 1075 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TCEAL1Q15170 157 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CRTC2Q53ET0 693 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 IQCHQ86VS3 1027 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ST7LQ8TDW4 575 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 IFT43Q96FT9 208 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TINAGL1Q9GZM7 467 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 DDX31Q9H8H2 851 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 DNMT3LQ9UJW3 386 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 SRPRBQ9Y5M8 271 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 COL14A1Q05707 1796 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF705EA8MWA4 302 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 RFPL3O75679 317 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 GUCY1A2P33402 732 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 MFSD5Q6N075 450 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 OTOAQ7RTW8 1153 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TPRA1Q86W33 373 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 TAGAPQ8N103 731 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZNF655Q8N720 491 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 ZSCAN18Q8TBC5 510 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 RAB7BQ96AH8 199 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 C18orf25Q96B23 403 aaPredicted RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 AP1S3Q96PC3 154 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CEP41Q9BYV8 373 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 MMP27Q9H306 513 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 CARS2Q9HA77 564 aaKnown RBP6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 M0R036 132 aa6.71□□□□□ -1.34
PDGFRA-201ENST00000257290 VILLO15195 856 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms