RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 WFIKKN2Q8TEU8 576 aa18.87■□□□□ 0.61
PTPRE-201ENST00000254667 DGCR6LQ9BY27 220 aa18.87■□□□□ 0.61
PTPRE-201ENST00000254667 PAIP1Q9H074 479 aaKnown RBP18.87■□□□□ 0.61
PTPRE-201ENST00000254667 NUAK2Q9H093 628 aa18.87■□□□□ 0.61
PTPRE-201ENST00000254667 FETUBQ9UGM5 382 aa18.87■□□□□ 0.61
PTPRE-201ENST00000254667 DAPK2Q9UIK4 370 aa18.87■□□□□ 0.61
PTPRE-201ENST00000254667 ERGIC3Q9Y282 383 aa18.87■□□□□ 0.61
PTPRE-201ENST00000254667 KRT36O76013 467 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 WFS1O76024 890 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 C8AP07357 584 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 CDH5P33151 784 aaPredicted RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TAF5Q15542 800 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TAF1AQ15573 450 aaPredicted RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 ZNF57Q68EA5 555 aaPredicted RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 GPR135Q8IZ08 494 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 ACAT2Q9BWD1 397 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 H7C0S8 307 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 VIPP01282 170 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 ASLP04424 464 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 COL6A1P12109 1028 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 GPD2P43304 727 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 NDUFA9Q16795 377 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TSPAN14Q8NG11 270 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 PCDH19Q8TAB3 1148 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 SLC47A1Q96FL8 570 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 PNPLA8Q9NP80 782 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 YJEFN3A6XGL0 299 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 RPL4P36578 427 aaKnown RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 RPIAP49247 311 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 SF1Q15637 639 aaKnown RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 SOWAHAQ2M3V2 549 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TIGD5Q53EQ6 642 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 RNF44Q7L0R7 432 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 ZNF248Q8NDW4 579 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 ZNF671Q8TAW3 534 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TWIST2Q8WVJ9 160 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 SH3GL2Q99962 352 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TDRD1Q9BXT4 1180 aaKnown RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 NMUR1Q9HB89 426 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 CRHR2Q13324 411 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 ADGRG2Q8IZP9 1017 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 SPATA22Q8NHS9 363 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TEX47Q8TBZ9 253 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 MFSD3Q96ES6 412 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 PNPLA3Q9NST1 481 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 INTS10Q9NVR2 710 aaKnown RBP18.86■□□□□ 0.61
PTPRE-201ENST00000254667 FNIP2Q9P278 1114 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 SPEF2Q9C093 1822 aa18.86■□□□□ 0.61
PTPRE-201ENST00000254667 TRIM43BA6NCK2 446 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 LRRC72A6NJI9 287 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 BUD31P41223 144 aaPredicted RBP18.85■□□□□ 0.61
PTPRE-201ENST00000254667 PTGIRP43119 386 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 DGKGP49619 791 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 LGALS3BPQ08380 585 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 CCNYL2Q5T2Q4 361 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 SULT1C3Q6IMI6 304 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 DAW1Q8N136 415 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 ENKURQ8TC29 256 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 APOLD1Q96LR9 279 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 CRNNQ9UBG3 495 aaPredicted RBP18.85■□□□□ 0.61
PTPRE-201ENST00000254667 ENTPD5O75356 428 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 POLR2JP52435 117 aaKnown RBP18.85■□□□□ 0.61
PTPRE-201ENST00000254667 PDK3Q15120 406 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 TAB1Q15750 504 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 CYP1B1Q16678 543 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 ANKRD22Q5VYY1 191 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 KIAA0930Q6ICG6 404 aaPredicted RBP18.85■□□□□ 0.61
PTPRE-201ENST00000254667 CRYBG2Q8N1P7 616 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 ZNF599Q96NL3 588 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 IPPKQ9H8X2 491 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 LTN1O94822 1766 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 LTBP3Q9NS15 1303 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 GABRDO14764 452 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 UROSP10746 265 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 ADSLP30566 484 aaPredicted RBP18.85■□□□□ 0.61
PTPRE-201ENST00000254667 NR1H2P55055 460 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 MPP1Q00013 466 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 LEMD2Q8NC56 503 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 TNKS2Q9H2K2 1166 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 PCDHGC4Q9Y5F7 938 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 IRAK2O43187 625 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 FAM155BO75949 473 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 PRG2P13727 222 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 AMER2Q8N7J2 671 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 SMYD1Q8NB12 490 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 PSMG2Q969U7 264 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 TMEM175Q9BSA9 504 aa18.85■□□□□ 0.61
PTPRE-201ENST00000254667 MRPS17Q9Y2R5 130 aaKnown RBP18.85■□□□□ 0.61
PTPRE-201ENST00000254667 ATXN2Q99700 1313 aaKnown RBP18.84■□□□□ 0.61
PTPRE-201ENST00000254667 DNAJA2O60884 412 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 GOT2P00505 430 aaKnown RBP18.84■□□□□ 0.61
PTPRE-201ENST00000254667 C8GP07360 202 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 CLCQ05315 142 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 TSSK3Q96PN8 268 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 SALL4Q9UJQ4 1053 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 M0R2N6 131 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 ARVCFO00192 962 aa18.84■□□□□ 0.61
PTPRE-201ENST00000254667 MFN2O95140 757 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms