RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 WDR48Q8TAF3 677 aa24.83■■□□□ 1.57
LSM7-201ENST00000252622 ABCG4Q9H172 646 aa24.83■■□□□ 1.57
LSM7-201ENST00000252622 HOMER3Q9NSC5 361 aa24.83■■□□□ 1.57
LSM7-201ENST00000252622 ZNHIT2Q9UHR6 403 aa24.83■■□□□ 1.57
LSM7-201ENST00000252622 TMPRSS11EQ9UL52 423 aa24.83■■□□□ 1.57
LSM7-201ENST00000252622 PLEKHM1Q9Y4G2 1056 aa24.83■■□□□ 1.57
LSM7-201ENST00000252622 TMEM8BA6NDV4 472 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 MT-CO3P00414 261 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 PROS1P07225 676 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 MSNP26038 577 aaKnown RBP24.82■■□□□ 1.56
LSM7-201ENST00000252622 ITGA9Q13797 1035 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 HLTFQ14527 1009 aaKnown RBP eCLIP24.82■■□□□ 1.56
LSM7-201ENST00000252622 CERCAMQ5T4B2 595 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 ADGRG6Q86SQ4 1221 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 C17orf82Q86X59 251 aaPredicted RBP24.82■■□□□ 1.56
LSM7-201ENST00000252622 MARCH9Q86YJ5 346 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 SLC35F6Q8N357 371 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 RASGEF1CQ8N431 466 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 ZDHHC1Q8WTX9 485 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 CCDC74AQ96AQ1 378 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 PBKQ96KB5 322 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 CCDC3Q9BQI4 270 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 OR2AG1Q9H205 316 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 ARFGAP3Q9NP61 516 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 SMOXQ9NWM0 555 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 PAK5Q9P286 719 aa24.82■■□□□ 1.56
LSM7-201ENST00000252622 GAPDHSO14556 408 aaPredicted RBP24.81■■□□□ 1.56
LSM7-201ENST00000252622 CHUKO15111 745 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 GRID2O43424 1007 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 VEGFDO43915 354 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 KIF5CO60282 957 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 ZNF8P17098 575 aaPredicted RBP24.81■■□□□ 1.56
LSM7-201ENST00000252622 TARDBPQ13148 414 aaKnown RBP eCLIP24.81■■□□□ 1.56
LSM7-201ENST00000252622 CHRNA6Q15825 494 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 FAM151BQ6UXP7 276 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 LINC00523Q86TU6 105 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 SFTPA2Q8IWL1 248 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 TAB3Q8N5C8 712 aaPredicted RBP24.81■■□□□ 1.56
LSM7-201ENST00000252622 OR4K2Q8NGD2 314 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 ETNK1Q9HBU6 452 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 TRMT1Q9NXH9 659 aaKnown RBP24.81■■□□□ 1.56
LSM7-201ENST00000252622 TTC7AQ9ULT0 858 aaPredicted RBP24.81■■□□□ 1.56
LSM7-201ENST00000252622 AKAP13Q12802 2813 aa24.81■■□□□ 1.56
LSM7-201ENST00000252622 PNLIPP16233 465 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 GLB1P16278 677 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 ZNF140P52738 457 aaPredicted RBP24.8■■□□□ 1.56
LSM7-201ENST00000252622 SEMA5AQ13591 1074 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 PTPRCAPQ14761 206 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 ZNF648Q5T619 568 aaPredicted RBP24.8■■□□□ 1.56
LSM7-201ENST00000252622 DEPDC7Q96QD5 511 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 APPL1Q9UKG1 709 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 PRKAB1Q9Y478 270 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 KCTD3Q9Y597 815 aa24.8■■□□□ 1.56
LSM7-201ENST00000252622 ZNF106Q9H2Y7 1883 aaKnown RBP24.8■■□□□ 1.56
LSM7-201ENST00000252622 NUDT21O43809 227 aaKnown RBP24.79■■□□□ 1.56
LSM7-201ENST00000252622 TCEA3O75764 348 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 SUN1O94901 812 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 PRAMEF1O95521 474 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 ETS1P14921 441 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 GSE1Q14687 1217 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 KHDC1Q4VXA5 237 aaKnown RBP24.79■■□□□ 1.56
LSM7-201ENST00000252622 LDLRAP1Q5SW96 308 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 C4orf22Q6V702 233 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 CHST15Q7LFX5 561 aaPredicted RBP24.79■■□□□ 1.56
LSM7-201ENST00000252622 NAGSQ8N159 534 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 PRELID2Q8N945 189 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 KDF1Q8NAX2 398 aaPredicted RBP24.79■■□□□ 1.56
LSM7-201ENST00000252622 GLIS1Q8NBF1 620 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 DDHD1Q8NEL9 900 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 FKBPLQ9UIM3 349 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 RABGEF1Q9UJ41 708 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 ASXL3Q9C0F0 2248 aa24.79■■□□□ 1.56
LSM7-201ENST00000252622 LDB2O43679 373 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 MTX2O75431 263 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 CDK14O94921 469 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 ACP5P13686 325 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 HADHAP40939 763 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 CLCNKAP51800 687 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 PRUNE1Q86TP1 453 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 OR13C4Q8NGS5 318 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 GDAP1Q8TB36 358 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 ZCCHC2Q9C0B9 1178 aaKnown RBP24.78■■□□□ 1.56
LSM7-201ENST00000252622 RAB6BQ9NRW1 208 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 RNF215Q9Y6U7 377 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 FRYQ5TBA9 3013 aa24.78■■□□□ 1.56
LSM7-201ENST00000252622 E7EVH7 732 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 NTN3O00634 580 aaPredicted RBP24.77■■□□□ 1.56
LSM7-201ENST00000252622 GPR39O43194 453 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 UGT1A9O60656 530 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 ECEL1O95672 775 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 UGT1A6P19224 532 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 UGT1A1P22309 533 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 UGT1A4P22310 534 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 RPL22P35268 128 aaKnown RBP24.77■■□□□ 1.56
LSM7-201ENST00000252622 UGT1A3P35503 534 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 UGT1A5P35504 534 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 MAZP56270 477 aaKnown RBP24.77■■□□□ 1.56
LSM7-201ENST00000252622 XIAPP98170 497 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 CDH17Q12864 832 aa24.77■■□□□ 1.56
LSM7-201ENST00000252622 TMEM115Q12893 351 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms