RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 SPATA19Q7Z5L4 167 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 COLGALT2Q8IYK4 626 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 ZNF599Q96NL3 588 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 ADI1Q9BV57 179 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TRIM8Q9BZR9 551 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TLR8Q9NR97 1041 aaKnown RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 AIG1Q9NVV5 245 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 PRG3Q9Y2Y8 225 aaPredicted RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 ASPDHA6ND91 283 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TPST1O60507 370 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CRCPO75575 148 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 SOAT2O75908 522 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CYBBP04839 570 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 ASGR1P07306 291 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 GNAO1P09471 354 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CDK4P11802 303 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TACR2P21452 398 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 HOXD9P28356 352 aaPredicted RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 OR1G1P47890 313 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 ZFP36L2P47974 494 aaKnown RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 APLP1P51693 650 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 RING1Q06587 406 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 RAD51Q06609 339 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TAF10Q12962 218 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 AFTPHQ6ULP2 937 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 CMTR2Q8IYT2 770 aaKnown RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 MGME1Q9BQP7 344 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 C9orf16Q9BUW7 83 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 C1QTNF3Q9BXJ4 246 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 NUSAP1Q9BXS6 441 aaKnown RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 MUC13Q9H3R2 512 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 TIMM22Q9Y584 194 aa16.17■□□□□ 0.18
LTBR-201ENST00000228918 OAS3Q9Y6K5 1087 aaKnown RBP16.17■□□□□ 0.18
LTBR-201ENST00000228918 TRIM64CA6NLI5 447 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 SYCE1LA8MT33 242 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 CDC7O00311 574 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 GPIP06744 558 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 TPP2P29144 1249 aaPredicted RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 GSK3BP49841 420 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 CDH15P55291 814 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 NKX3-2P78367 333 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 HPCAP84074 193 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 GRIK2Q13002 908 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 NFYCQ13952 458 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 TRIM71Q2Q1W2 868 aaKnown RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 XKR7Q5GH72 579 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 FAM26DQ5JW98 314 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 LPCAT2Q7L5N7 544 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 SYVN1Q86TM6 617 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 PTRH1Q86Y79 214 aaKnown RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 TRIB2Q92519 343 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 FUBP1Q96AE4 644 aaKnown RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 CENPNQ96H22 339 aaPredicted RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 TEX37Q96LM6 180 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 NSMCE3Q96MG7 304 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 GPR21Q99679 349 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 CCDC68Q9H2F9 335 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 ALG2Q9H553 416 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 PCDHGA4Q9Y5G9 962 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 ACTL7AQ9Y615 435 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 A0A0D9SEW6 157 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 NPEPPSL1A6NEC2 478 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 STX16O14662 325 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 KLK8O60259 260 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 EEDO75530 441 aaKnown RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 PRDX3P30048 256 aaKnown RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 KCNK10P57789 538 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 MERTKQ12866 999 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 SPRED1Q7Z699 444 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 ERI1Q8IV48 349 aaKnown RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 TRPV3Q8NET8 790 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 OR4K2Q8NGD2 314 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 VPS33AQ96AX1 596 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 ZFYVE28Q9HCC9 887 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 TUBA8Q9NY65 449 aaPredicted RBP16.16■□□□□ 0.18
LTBR-201ENST00000228918 ZNF225Q9UK10 706 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 PCTPQ9UKL6 214 aa16.16■□□□□ 0.18
LTBR-201ENST00000228918 TCRBV5S2A0A599 114 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 MANSC4A6NHS7 340 aaPredicted RBP16.15■□□□□ 0.18
LTBR-201ENST00000228918 PFDN1O60925 122 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 FCGR1AP12314 374 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 RPL10P27635 214 aaKnown RBP16.15■□□□□ 0.18
LTBR-201ENST00000228918 HUNKP57058 714 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 NAA20P61599 178 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 SLC36A3Q495N2 470 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 CTXN3Q4LDR2 81 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 RABL3Q5HYI8 236 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 PAGE3Q5JUK9 113 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 EFL1Q7Z2Z2 1120 aaKnown RBP16.15■□□□□ 0.18
LTBR-201ENST00000228918 GLT6D1Q7Z4J2 308 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 RTN4RL1Q86UN2 441 aaPredicted RBP16.15■□□□□ 0.18
LTBR-201ENST00000228918 RASAL3Q86YV0 1011 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 TNIP2Q8NFZ5 429 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 DNAJB14Q8TBM8 379 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 BRINP2Q9C0B6 783 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 PTBP2Q9UKA9 531 aaKnown RBP16.15■□□□□ 0.18
LTBR-201ENST00000228918 OAZ3Q9UMX2 235 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 ANKRD12Q6UB98 2062 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 SYN3O14994 580 aa16.15■□□□□ 0.18
LTBR-201ENST00000228918 ACOX3O15254 700 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms