RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NNMTP40261 264 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ETV4P43268 484 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 PTPN5P54829 565 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 WNT3AP56704 352 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ABCE1P61221 599 aaKnown RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 SOX4Q06945 474 aaPredicted RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 BNIP3Q12983 259 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 DUSP4Q13115 394 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 TPSAB1Q15661 275 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 MAMDC4Q6UXC1 1216 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ZNF467Q7Z7K2 595 aaPredicted RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 CNDP1Q96KN2 507 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 NELL2Q99435 816 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 COQ10BQ9H8M1 238 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 RNF186Q9NXI6 227 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 TRMT6Q9UJA5 497 aaKnown RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 FZD10Q9ULW2 581 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ATAD5Q96QE3 1844 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 DOCK1Q14185 1865 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ZNF839A8K0R7 811 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 GCATO75600 419 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 TIPRLO75663 272 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 BAIAP3O94812 1187 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 FKBP9O95302 570 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 PBX3P40426 434 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 CCR10P46092 362 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 SERPINH1P50454 418 aaKnown RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 AFF1P51825 1210 aaKnown RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 SLC18A1P54219 525 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 NUP107P57740 925 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 GNA12Q03113 381 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 DLG2Q15700 870 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 SLC9B1Q4ZJI4 515 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 AGKQ53H12 422 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ALFQ53S48 1182 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 INTS6LQ5JSJ4 861 aaKnown RBP10.53□□□□□ -0.72
VPS18-201ENST00000220509 FAM26DQ5JW98 314 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 C17orf99Q6UX52 265 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 COLGALT2Q8IYK4 626 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 OFCC1Q8IZS5 231 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 DSELQ8IZU8 1212 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 CENPSQ8N2Z9 138 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 PQLC3Q8N755 202 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 LRTOMTQ8WZ04 291 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 OR52B2Q96RD2 323 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 CTRCQ99895 268 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 RNF208Q9H0X6 261 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 ING2Q9H160 280 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 POLR1BQ9H9Y6 1135 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 SCUBE2Q9NQ36 999 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 FBXO5Q9UKT4 447 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 VPS4AQ9UN37 437 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 STON1Q9Y6Q2 735 aa10.53□□□□□ -0.72
VPS18-201ENST00000220509 TRPC5OSA6NMA1 111 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 CAPN14A8MX76 684 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 SSX5O60225 188 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 HOXA11P31270 313 aaPredicted RBP10.52□□□□□ -0.72
VPS18-201ENST00000220509 ATP6V1E1P36543 226 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 RHOAP61586 193 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 CDKL1Q00532 357 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 TAF10Q12962 218 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 POTEHQ6S545 545 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.52□□□□□ -0.72
VPS18-201ENST00000220509 B3GALT6Q96L58 329 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 AGAP2Q99490 1192 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.72
VPS18-201ENST00000220509 XPR1Q9UBH6 696 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 CNTN6Q9UQ52 1028 aa10.52□□□□□ -0.72
VPS18-201ENST00000220509 A6NCN8 305 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 PSMD12O00232 456 aaPredicted RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 TSPAN4O14817 238 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 SEPT4O43236 478 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 TLR5O60602 858 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 PTPN2P17706 415 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 MPSTP25325 297 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 YAP1P46937 504 aaKnown RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 HK2P52789 917 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 PHC1P78364 1004 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 MYBPC1Q00872 1141 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 ELAVL2Q12926 359 aaKnown RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 PRKAA1Q13131 559 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 FAM209BQ5JX69 171 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 NCBP2-AS2Q69YL0 99 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 COG8Q96MW5 612 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 TSEN34Q9BSV6 310 aaKnown RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 SENP6Q9GZR1 1112 aaPredicted RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 EFCAB1Q9HAE3 211 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 TMEM216Q9P0N5 145 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 UXTQ9UBK9 157 aaPredicted RBP10.52□□□□□ -0.73
VPS18-201ENST00000220509 DAPK2Q9UIK4 370 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 CRLS1Q9UJA2 301 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 ZNF229Q9UJW7 825 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 CROCCQ5TZA2 2017 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 A0A1W2PPW3 197 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 C9JVG2 144 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 FUCA1P04066 466 aa10.52□□□□□ -0.73
VPS18-201ENST00000220509 HEXBP07686 556 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms