RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 DGUOKQ16854 277 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ZNF181Q2M3W8 571 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 CCNYL2Q5T2Q4 361 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 STEAP3Q658P3 488 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 SMG8Q8ND04 991 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 RP9Q8TA86 221 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 GDF15Q99988 308 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 USB1Q9BQ65 265 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ERVMER34-1Q9H9K5 563 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 MRPL39Q9NYK5 338 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 IPPQ9Y573 584 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 CHADO15335 359 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 AVILO75366 819 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 TIPRLO75663 272 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 CRHR1P34998 444 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 HTR3AP46098 478 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 TAF6P49848 677 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 PON2Q15165 354 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 INTS11Q5TA45 600 aaKnown RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 LGSNQ5TDP6 509 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 ADCK1Q86TW2 530 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 NDUFAF2Q8N183 169 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 SFRP1Q8N474 314 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 DNAI2Q9GZS0 605 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 LRRC40Q9H9A6 602 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 RAB6BQ9NRW1 208 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 MTMR10Q9NXD2 777 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 PAK5Q9P286 719 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 TEX264Q9Y6I9 313 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 TANC1Q9C0D5 1861 aa13.56□□□□□ -0.24
GABPB1-201ENST00000220429 MN1Q10571 1320 aaPredicted RBP13.56□□□□□ -0.24
GABPB1-201ENST00000220429 H0YC42 278 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 M0R3G1 203 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 FGF3P11487 239 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 PCNAP12004 261 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CYP2F1P24903 491 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 TALDO1P37837 337 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 DDOSTP39656 456 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 TPD52P55327 224 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 POLD3Q15054 466 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 DPYSL2Q16555 572 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CATSPEREQ5SY80 951 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CCDC185Q8N715 623 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 OR2T34Q8NGX1 318 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 ST6GAL2Q96JF0 529 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 SORT1Q99523 831 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 MAFFQ9ULX9 164 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 BCLAF3A2AJT9 711 aaKnown RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 LEUTXA8MZ59 168 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 VAPBO95292 243 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CYP2B6P20813 491 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CBLP22681 906 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 PNPLA4P41247 253 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CPT1AP50416 773 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CRYBB1P53674 252 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 LILRA4P59901 499 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 NFE2L1Q14494 772 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CTF1Q16619 201 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 TYSND1Q2T9J0 566 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 FAM214AQ32MH5 1076 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 FAXCQ5TGI0 409 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 CELF2-AS1Q8N7Q2 184 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 MARC2Q969Z3 335 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 PCDHAC1Q9H158 963 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 DHX35Q9H5Z1 703 aaKnown RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 ZC4H2Q9NQZ6 224 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 AP4E1Q9UPM8 1137 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 PCDHGA7Q9Y5G6 932 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 PCDHGA10Q9Y5H3 936 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 ZNF487B1APH4 448 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 KBTBD13C9JR72 458 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 TBX1O43435 398 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 SEC24AO95486 1093 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 YES1P07947 543 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 MAGP20916 626 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 HTR1BP28222 390 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 SCNN1AP37088 669 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 OR2B6P58173 313 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 GPR85P60893 370 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 LEXMQ3ZCV2 418 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 HORMAD1Q86X24 394 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 ADGRF2Q8IZF7 708 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 APBB2Q92870 758 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 TOP1MTQ969P6 601 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 DUS3LQ96G46 650 aaKnown RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 KCTD15Q96SI1 283 aaPredicted RBP13.55□□□□□ -0.24
GABPB1-201ENST00000220429 DCAF16Q9NXF7 216 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 ADA2Q9NZK5 511 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 RAD54BQ9Y620 910 aa13.55□□□□□ -0.24
GABPB1-201ENST00000220429 RNF103-CHMP3A0A140T963 221 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 C17orf102A2RUQ5 167 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 TOR1AO14656 332 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 TSPAN4O14817 238 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 B4GAT1O43505 415 aa13.54□□□□□ -0.24
GABPB1-201ENST00000220429 IFI30P13284 250 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms