RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 ZNF510Q9Y2H8 683 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 NPHS1O60500 1241 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 MAFKO60675 156 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 TIPRLO75663 272 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 STK16O75716 305 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 CAPN1P07384 714 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 COL6A1P12109 1028 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 NELFEP18615 380 aaKnown RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 COL5A3P25940 1745 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 RTP2Q5QGT7 225 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 MICU2Q8IYU8 434 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 CHPFQ8IZ52 775 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 WDR60Q8WVS4 1066 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 C9orf16Q9BUW7 83 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PCDH12Q9NPG4 1184 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 ANKRD66B4E2M5 251 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 ESR1P03372 595 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 HNF4AP41235 474 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 INPP1P49441 399 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 USP46P62068 366 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PDK3Q15120 406 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 TPGS2Q68CL5 300 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 UGT2B28Q9BY64 529 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 TMEM248Q9NWD8 314 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 HS6ST1O60243 411 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 MT-ND1P03886 318 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 FGF3P11487 239 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PTGER3P43115 390 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 MAGEA11P43364 429 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 RFX3P48380 749 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PRMT2P55345 433 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 CNTN1Q12860 1018 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 SERINC3Q13530 473 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PIK3R6Q5UE93 754 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 IL23RQ5VWK5 629 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 FRMD7Q6ZUT3 714 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 GPR180Q86V85 440 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 CMTM8Q8IZV2 173 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 ZNF276Q8N554 614 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 CPSF7Q8N684 471 aaKnown RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 DACT3Q96B18 629 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 RTP4Q96DX8 246 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 OR52E6Q96RD3 313 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 MYOCQ99972 504 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PAPOLBQ9NRJ5 636 aaKnown RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 TRPC4Q9UBN4 977 aa13.03□□□□□ -0.32
HDAC7-201ENST00000080059 CORO1CQ9ULV4 474 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-201ENST00000080059 PTGES3LE9PB15 166 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 IL5RAQ01344 420 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 LYPLAL1Q5VWZ2 237 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 CHST9Q7L1S5 443 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 LYSMD3Q7Z3D4 306 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 RALGPS2Q86X27 583 aaPredicted RBP13.02□□□□□ -0.32
HDAC7-201ENST00000080059 TREML1Q86YW5 311 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 SMG7Q92540 1137 aaKnown RBP13.02□□□□□ -0.32
HDAC7-201ENST00000080059 APOLD1Q96LR9 279 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 CIB1Q99828 191 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 GRIP2Q9C0E4 1043 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 FAM83DQ9H4H8 585 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 C6orf203Q9P0P8 240 aaPredicted RBP13.02□□□□□ -0.32
HDAC7-201ENST00000080059 KCNE2Q9Y6J6 123 aa13.02□□□□□ -0.32
HDAC7-201ENST00000080059 TCRBV5S1A1TA0A578 114 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 HAS3O00219 553 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 KPNA5O15131 536 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 EFCAB14O75071 495 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 FTH1P02794 183 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 CLK1P49759 484 aaKnown RBP13.02□□□□□ -0.33
HDAC7-201ENST00000080059 PKDCCQ504Y2 493 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 PAQR9Q6ZVX9 377 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 MAGEC3Q8TD91 643 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 SH3RF2Q8TEC5 729 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 KLHL32Q96NJ5 620 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 EXOSC4Q9NPD3 245 aaKnown RBP13.02□□□□□ -0.33
HDAC7-201ENST00000080059 ZNF490Q9ULM2 529 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-201ENST00000080059 AP4B1Q9Y6B7 739 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 M0R3G1 203 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 FOLH1Q04609 750 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 SULT2A1Q06520 285 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 PLCL1Q15111 1095 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 EID3Q8N140 333 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 ASZ1Q8WWH4 475 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 ACDQ96AP0 544 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 OTUB1Q96FW1 271 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-201ENST00000080059 MRGPRX2Q96LB1 330 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 ZNF599Q96NL3 588 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 GIMAP4Q9NUV9 329 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 KCTD5Q9NXV2 234 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 DEC1Q9P2X7 70 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 GALPQ9UBC7 116 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 ASF1AQ9Y294 204 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 MYRFQ9Y2G1 1151 aa13.02□□□□□ -0.33
HDAC7-201ENST00000080059 WASP42768 502 aa13.01□□□□□ -0.33
HDAC7-201ENST00000080059 GNPDA1P46926 289 aa13.01□□□□□ -0.33
HDAC7-201ENST00000080059 NAA20P61599 178 aa13.01□□□□□ -0.33
HDAC7-201ENST00000080059 PWP1Q13610 501 aa13.01□□□□□ -0.33
HDAC7-201ENST00000080059 NEDD8Q15843 81 aa13.01□□□□□ -0.33
HDAC7-201ENST00000080059 TRIM60Q495X7 471 aa13.01□□□□□ -0.33
HDAC7-201ENST00000080059 MTX3Q5HYI7 312 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms