RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Q3TYS2 187 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lipo3Q3UT41 399 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Map4k2Q61161 821 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pdcd4Q61823 469 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Zfp438Q8BFX2 798 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Vmn1r24Q8R2D6 296 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mospd2Q9CWP6 518 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Aar2Q9D2V5 384 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rgs1Q9JL25 209 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ift172Q6VH22 1749 aa16.52■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gdpd4Q3TT99 632 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Q3UE31 404 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Zmat1Q3V0C1 714 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Snrnp25Q8VIK1 123 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Celf2Q9Z0H4 508 aaKnown RBP16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Spata13Q5DU57 656 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mgat5bQ765H6 792 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Setd7Q8VHL1 366 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Klhl22Q99JN2 634 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Htra1Q9R118 480 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm3594E9Q2A7 267 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Trim39Q9ESN2 488 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rab23P35288 237 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Sema3dQ8BH34 777 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ebna1bp2Q9D903 306 aaKnown RBP16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Aif1lQ9EQX4 150 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kir3dl1P83555 432 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kcnt1Q6ZPR4 1224 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 OlahQ8R197 265 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Nudt4Q8R2U6 179 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Adgrb1Q3UHD1 1582 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mrgpra2aA0A0R4J1Z0 331 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm5796E9Q7M8 205 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm3542K7N6U2 270 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm3629K7N6Y2 205 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm10340K7N708 205 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm3696K7N751 203 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm8281L7N235 204 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gosr2O35166 212 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cyp4f37Q3V1F1 546 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rap1gap2Q5SVL6 712 aaKnown RBP16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Msantd1Q8BIL2 278 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gpr150Q8BL07 427 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Alg3Q8K2A8 438 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kiaa0141Q9DCV6 510 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm11027G8JL69 66 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Arpc4P59999 168 aaKnown RBP16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Lsm3P62311 102 aaKnown RBP16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Zfp935Q14DI0 353 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Vmn1r203Q8R273 311 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr30Q8VGD8 315 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FarsbQ9WUA2 589 aaKnown RBP16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Barx2O08686 283 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm5800Q497L3 186 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Txndc15Q6P6J9 344 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tmem17Q8K0U3 198 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Asb11Q9CQ31 323 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Adam28Q9JLN6 793 aa16.51■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Dcpp3L7N259 170 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rpl26P61255 145 aaKnown RBP16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Dok6Q2MHE5 331 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Serpinb9dQ8BMT0 377 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Plcz1Q8K4D7 647 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Prl8a6Q9DAY2 240 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Slc25a54B1AUS6 473 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Eno2P17183 434 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tgfb2P27090 414 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pih1d3Q3KNI6 218 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Naa11Q3UX61 218 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Angptl1Q640P2 490 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Scaf4Q6PFF0 1209 aaKnown RBP16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Pan2Q8BGF7 1200 aaKnown RBP16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 PpatQ8CIH9 517 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 AslQ91YI0 464 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 SrpraQ9DBG7 636 aaKnown RBP16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 9630041A04RikD3Z3U4 205 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cbx2P30658 519 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Rit1P70426 219 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Thap1Q8CHW1 210 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 S100a14Q9D2Q8 104 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Q9D4W2 315 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr703Q9EPF5 319 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mia3Q8BI84 1930 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm8871F7AXK2 190 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Fabp1P12710 127 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 OcmP51879 109 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm45902Q3UDN3 361 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Trp53i11Q4QQM4 189 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Serpinb7Q9D695 380 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Dpp6Q9Z218 804 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Kcnn4O89109 425 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 CyctP00015 105 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Caskin2Q8VHK1 1201 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Bpifa6Q0VGU8 367 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Ssr2Q9CPW5 183 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 EefsecQ9JHW4 583 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 DccP70211 1447 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Sppl2cA2A6C4 690 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 PotegA5H0M4 473 aa16.5■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm16427J3QN52 483 aa16.5■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29 ms