RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ints10Q8K2A7 710 aaKnown RBP13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr801Q8VEU1 318 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Traf7Q922B6 594 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pwp1Q99LL5 501 aaKnown RBP13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ist1Q9CX00 362 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Hipk3Q9ERH7 1192 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 PtprfA2A8L5 1898 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Thsd7bQ6P4U0 1607 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr620E9PZ66 313 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Zfp882E9Q4R4 555 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Pcmt1P23506 227 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 PhexP70669 749 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ano7Q14AT5 859 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fam131bQ3TY60 332 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 LcorlQ3U285 600 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 WhammQ571B6 793 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Bend6Q6PFX2 281 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Polr2eQ80UW8 210 aaKnown RBP13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gtf2a2Q80ZM7 109 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 LppQ8BFW7 613 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fmo9Q8C116 539 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Vmn1r198Q8R263 300 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Imp4Q8VHZ7 291 aaKnown RBP13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Capn8Q91VA3 703 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lgals12Q91VD1 314 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Hdac11Q91WA3 347 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Dph2Q9CR25 489 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Efcab1Q9D3N2 212 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 2010109A12RikQ9D875 119 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Slc6a14Q9JMA9 638 aa13.36□□□□□ -0.27
Nup88-201ENSMUST00000035283 Erich1E9PY43 332 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Vmn2r38G3UYA8 861 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Vmn2r33K7N705 861 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr237-ps1K9J725 310 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 P01652 108 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Spp1P10923 294 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gdf5P43027 495 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gdf6P43028 454 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 WasP70315 520 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fam171bQ14CH0 825 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Kansl1lQ5DTI6 991 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fzd6Q61089 709 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 A4galtQ67BJ4 359 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ireb2Q811J3 963 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Noc4lQ8BHY2 516 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tyw1Q8BJM7 721 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Sfr1Q8BP27 319 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 LzicQ8K3C3 190 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 MiosQ8VE19 875 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gpn2Q8VEJ1 310 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr695Q8VFM3 315 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 VitQ8VHI5 650 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Usb1Q91W78 267 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lrrc40Q9CRC8 602 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Spesp1Q9D5A0 399 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ppp1r2Q9DCL8 206 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cyp4a29A0A087WPC3 509 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 4921501E09RikA0A0R4J054 908 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Man1b1A2AJ15 658 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cylc2B1AWN8 422 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tmem45a2B7ZWJ5 289 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Vmn2r54K7N649 806 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Map2k3O09110 347 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Cyp4a14O35728 507 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Psmb10O35955 273 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ldb2O55203 373 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 P01664 111 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 TxnP10639 105 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 CtsdP18242 410 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Traf2P39429 501 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Mex3cQ05A36 652 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 DtlQ3TLR7 729 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Armc7Q3UJZ3 198 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Gm5800Q497L3 186 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 SynaQ5G5D5 617 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 MelkQ61846 643 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Klhl23Q6GQU2 558 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Rtl3Q6P1Y1 553 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Eif2s1Q6ZWX6 315 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr20Q7TRX9 314 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 D3Ertd751eQ8BGN2 192 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Q8BP99 230 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Nup54Q8BTS4 510 aaKnown RBP13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 IrgcQ8C262 412 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Tmem221Q8K071 230 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Ppp1r8Q8R3G1 351 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Klrb1fQ8VD98 217 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Olfr1361Q8VFH0 317 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Paip2bQ91W45 136 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Znf639Q99KZ6 485 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Atoh8Q99NA2 322 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Them5Q9CQJ0 248 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Serpinb11Q9CQV3 388 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Art4Q9CRA0 300 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 CtszQ9WUU7 306 aa13.35□□□□□ -0.27
Nup88-201ENSMUST00000035283 Lcn6A2AJB9 181 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Aldoart1A6ZI46 419 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Nfx1B1AY10 1114 aaKnown RBP13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 Fkbp7O54998 218 aa13.34□□□□□ -0.27
Nup88-201ENSMUST00000035283 RxraP28700 467 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms