RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Atp5jP97450 108 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 2900092C05RikQ5I0V9 184 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Dnajc1Q61712 552 aaKnown RBP9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr1505Q7TQQ2 316 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ubash3bQ8BGG7 638 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Fam163bQ8BUM6 167 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Dlk2Q8K1E3 382 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ahi1Q8K3E5 1047 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Myoz3Q8R4E4 245 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr541Q8VGM0 312 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Rbm47Q91WT8 590 aaKnown RBP9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Eif3mQ99JX4 374 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Atg7Q9D906 698 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cpne8Q9DC53 577 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Tnfrsf21Q9EPU5 655 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Arl10Q9QXJ4 243 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Spag17Q5S003 2320 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Greb1lB9EJV3 1913 aa9.89□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Man1b1A2AJ15 658 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Skint11A7XV14 364 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pate3B3GLJ3 98 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cldn24D3YXJ9 220 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 2610021A01RikE9Q0Q3 834 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Fbxw9F8VPX2 458 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm17535J3KMR8 224 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Top6blJ3QMY9 579 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Kpna4O35343 521 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 PdynO35417 248 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 PargO88622 969 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Spp1P10923 294 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gas2P11862 314 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 FesP16879 822 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Slc10a3P21129 473 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pou2f3P31362 431 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Psme2P97372 239 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Adora2bQ60614 332 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 RgnQ64374 299 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Nrg1Q6DR99 700 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 NfascQ810U3 1240 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cxcr1Q810W6 351 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ubp1Q811S7 540 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gabra5Q8BHJ7 463 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Parp12Q8BZ20 711 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Lrif1Q8CDD9 755 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pth2rQ91V95 546 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Pramel1Q99MW3 458 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 KlbQ99N32 1043 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ift27Q9D0P8 186 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Galk1Q9R0N0 392 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm6685D3YYP3 228 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Olfr564E9PWA8 316 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Polr2jO08740 117 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Aif1O70200 147 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 P01740 135 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 H2-AaP01910 256 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 PdgfrbP05622 1098 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Epb42P49222 691 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ube2e3P52483 207 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Mkl2P59759 1080 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Npy2rP97295 381 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 BtrcQ3ULA2 605 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Wdr18Q4VBE8 431 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Klra2Q60660 288 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ca4Q64444 305 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 MtdhQ80WJ7 579 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Nipal4Q8BZF2 406 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cers6Q8C172 384 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Tfb1mQ8JZM0 345 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cables1Q9ESJ1 568 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 NagaQ9QWR8 415 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Btaf1E9QAE3 1848 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gm8909G3UXE9 396 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 TecP24604 630 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Jak1P52332 1153 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Ephb3P54754 993 aaKnown RBP9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 UtyP79457 1212 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Znf800Q0VEE6 662 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Kctd21Q3URF8 260 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Itga1Q3V3R4 1179 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 NkaplQ5SZT7 395 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Grb10Q60760 621 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Slc6a3Q61327 619 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 TpbglQ8C013 384 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Kctd12bQ8C7J6 292 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Gtf2h3Q8VD76 309 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Mob2Q8VI63 235 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 GcshQ91WK5 170 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cyp3a41aQ9JMA7 504 aa9.88□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Zscan4eA0A1B0GRE8 505 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Vmn2r120E9PX34 856 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Cntnap3E9PY62 1287 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Vmn1r39G3UWE6 305 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 DldO08749 509 aaKnown RBP9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Smpd2O70572 419 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Rad51Q08297 339 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Fam169aQ5XG69 665 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Eif2dQ61211 570 aaKnown RBP9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 CochQ62507 552 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Serpina3aQ6P4P1 422 aa9.87□□□□□ -0.83
Ldlr-201ENSMUST00000034713 Zfp759Q7M6X3 721 aa9.87□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms