RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Tubb3Q9ERD7 450 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Htra2Q9JIY5 458 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Lrrc73B2RWC4 316 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Kcnk3O35111 409 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 DhfrP00375 187 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Q810M1 233 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cd300ldQ8VCH2 221 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr801Q8VEU1 318 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 CabyrQ9D424 453 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Q9D4W2 315 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Naa10Q9QY36 235 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Chd2E9PZM4 1827 aaKnown RBP13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Zfp985A2A7A5 519 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Fam46aD3Z5S8 447 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Esp34G3UXG0 151 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Smpdl3bP58242 456 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vamp2P63044 116 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 4930502E18RikQ14BQ3 236 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ankdd1bQ14DN9 521 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Txndc15Q6P6J9 344 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Man2a2Q8BRK9 1152 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Timmdc1Q8BUY5 285 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Slc25a36Q922G0 311 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Decr1Q9CQ62 335 aaKnown RBP13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vnn1Q9Z0K8 512 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gabrb2P63137 512 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 TgfbiP82198 683 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Clca4bQ3UW98 925 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mon1aQ6PDG8 556 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Castor2Q8CAB8 329 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Arfgap1Q9EPJ9 414 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Drg2Q9QXB9 364 aaKnown RBP13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Tas2r122D3YU55 309 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm5796E9Q7M8 205 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm3629K7N6Y2 205 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm10340K7N708 205 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm6401L7N2C0 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 ArP19091 899 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 AbrQ5SSL4 859 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Arcn1Q5XJY5 511 aaKnown RBP13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Fbxl8Q8CIG9 374 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm7929A0A286YDV3 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm21977F6U3N7 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8247F6VRJ8 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8005F6YKY3 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm3015F6ZAP6 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8212F6ZMY5 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm7954F7BAX1 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8138F7BY56 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8232F7CFJ3 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm17079F7D8Y4 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8094K7N6U8 211 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8165L7N218 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8122L7N2C7 213 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm17078M0QW51 211 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Magea5O89009 320 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Magea8O89012 320 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Hdac2P70288 488 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Bcl2a1bQ497M6 172 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 MarcoQ60754 518 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 PmlQ60953 885 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr393Q8VGR6 312 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cdhr1Q8VHP6 859 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Olfr704Q9EPF6 315 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 9530002B09RikQ9EPV7 135 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ing1Q9QXV3 279 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Faap100A2ACJ2 879 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vmn2r125D3Z3M1 369 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Rdh8D3Z6W3 317 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Apold1E9Q0X2 246 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Igf2bp1O88477 577 aaKnown RBP13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Serpinf1P97298 417 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Q8BGA7 448 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mnd1Q8K396 205 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Mat2bQ99LB6 334 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Cops7aQ9CZ04 275 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Znf207Q9JMD0 495 aaKnown RBP13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 LipaQ9Z0M5 397 aa13.89□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Nat3P50296 290 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Fut11Q8BHC9 489 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ptrh1Q8BW00 204 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Vps9d1Q8C190 649 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Grhl2Q8K5C0 625 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Impg1Q8R1W8 798 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Zfp709Q8VC29 727 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Slc25a3Q8VEM8 357 aaKnown RBP13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Zfp84Q9D654 559 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Fam83dQ9D7I8 585 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Paqr5Q9DCU0 330 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Hsd17b11Q9EQ06 298 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Ssna1Q9JJ94 119 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Usp17lbE9Q9U0 468 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Gm8229K7N749 213 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Azin1O35484 448 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Npy5rO70342 466 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Lta4hP24527 611 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 KapP61110 121 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Pnpla5Q32LZ8 432 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Pdp1Q3UV70 538 aa13.88□□□□□ -0.19
Col5a1-201ENSMUST00000028280 Slc9b2Q5BKR2 547 aa13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms