RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Rhox13F6YCR7 232 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 AvilO88398 819 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 UoxP25688 303 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rnf145Q5SWK7 663 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Iqcf4Q6P8Y2 204 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Setdb2Q8C267 713 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rnaseh2aQ9CWY8 301 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 CrtapQ9CYD3 400 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 SrpraQ9DBG7 636 aaKnown RBP4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Klhl1Q9JI74 751 aa4.55□□□□□ -1.68
Prkdc-201ENSMUST00000023352 IqccA2ADZ8 418 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr456B2RT27 312 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm7275E9Q1B3 247 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm11027G8JL69 66 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm6356L7N2A7 188 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gp5O08742 567 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Serpinb9eO08806 377 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Kcnu1O54982 1121 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PargO88622 969 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 AhrP30561 848 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mmp13P33435 472 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cdh9P70407 786 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Tnfaip8l3Q3TBL6 204 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PapolgQ6PCL9 739 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rps9Q6ZWN5 194 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Reep1Q8BGH4 201 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cdh7Q8BM92 785 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Slc9a4Q8BUE1 797 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zbtb8bQ8CII0 484 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Dennd1aQ8K382 1016 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr458Q8VF80 313 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr695Q8VFM3 315 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr457Q8VGP5 313 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 1700129C05RikQ9CQ77 218 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mrpl28Q9D1B9 257 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Rtl8cQ9D6I0 112 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 LipaQ9Z0M5 397 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Orc1Q9Z1N2 840 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Kcnt2D3Z649 1135 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ccdc149F6V035 524 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Galnt1O08912 559 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pou2f3P31362 431 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 NadkP58058 439 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Smu1Q3UKJ7 513 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr212Q7TS33 327 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pcdhb4Q91XZ6 784 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pcdha1Q91Y21 948 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 MlycdQ99J39 492 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 PompQ9CQT5 141 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 AhspQ9CY02 102 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pbdc1Q9D0B6 198 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Sec23bQ9D662 767 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 March8Q9DBD2 286 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Prl2c5Q9JLV9 222 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 C4bP01029 1738 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zscan4eA0A1B0GRE8 505 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zfp808B8JJZ4 753 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 EXOC1LB9EK06 172 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm6205E9PZS2 359 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm7971J3QMM8 481 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mknk1O08605 427 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Slc6a2O55192 617 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 DcnP28654 354 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 AnpepP97449 966 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 CkbQ04447 381 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Eml1Q05BC3 814 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Trim40Q3UWA4 246 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Zmat1Q3V0C1 714 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pgrmc2Q80UU9 217 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gm6367Q8C6L9 287 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 AA792892Q8C6S1 278 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mamdc2Q8CG85 686 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 AclyQ91V92 1091 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cox4i2Q91W29 172 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 NelfcdQ922L6 591 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Fuca2Q99KR8 461 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Decr1Q9CQ62 335 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Bcl2l12Q9D3J3 255 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Vstm5Q9D806 199 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lima1Q9ERG0 753 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 FanceB8JJD6 213 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mroh4G3X8W1 983 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Ephb3P54754 993 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Fbxo40P62932 710 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Meaf6Q2VPQ9 191 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pdss1Q33DR2 409 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Alg10bQ3UGP8 474 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Scn2bQ56A07 215 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Gdpd5Q640M6 607 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Cd34Q64314 382 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Slc25a12Q8BH59 677 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Mab21l2Q8BPP1 359 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Pi4k2bQ8CBQ5 469 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr615Q8VGY4 313 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Tmem168Q91VX9 697 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Lactb2Q99KR3 288 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Snrpb2Q9CQI7 225 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Raver1Q9CW46 748 aaKnown RBP4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Taf1dQ9D4V4 322 aa4.54□□□□□ -1.68
Prkdc-201ENSMUST00000023352 Olfr706Q9EPF8 316 aa4.54□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms