RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Cyth4Q80YW0 393 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 1700001K19RikQ80ZT1 219 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Efr3aQ8BG67 819 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slco2b1Q8BXB6 683 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 P3h2Q8CG71 703 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hmgcll1Q8JZS7 343 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mark1Q8VHJ5 795 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Depdc7Q91WS7 511 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Clstn3Q99JH7 956 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam83dQ9D7I8 585 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tsga8Q9JJL0 238 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Smpd3Q9JJY3 655 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rpl9-ps1S4R1R7 191 aa10.83□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam46dB1ATX6 390 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Spin2dB1B0R2 236 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Zar1lC3VD30 291 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tcp10cE9Q046 482 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm20503G3UZK1 150 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pax3P24610 479 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Foxk1P42128 719 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dab1P97318 588 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 AxlQ00993 888 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam117bQ3U3E2 584 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ppm1hQ3UYC0 513 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nr1d2Q60674 576 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nr6a1Q64249 495 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Prrt3Q6PE13 971 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc39a14Q75N73 489 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm6377Q8BHV4 303 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Thoc5Q8BKT7 683 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Fam126bQ8C729 530 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Plekhn1Q8C886 359 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ablim1Q8K4G5 861 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Actr8Q8R2S9 624 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ttc4Q8R3H9 386 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ssxb1Q9CPU1 170 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 PpidQ9CR16 370 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Msgn1Q9JK54 188 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ptk2bQ9QVP9 1009 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm13101A2ASJ0 481 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mtnd4P03911 459 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cd4P06332 457 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 SnnP61807 88 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 H2-M3Q31093 336 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Scrn3Q3TMH2 418 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cyp3a13Q64464 503 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr299Q7TS05 330 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Znf423Q80TS5 1292 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gtf2a2Q80ZM7 109 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gfm2Q8R2Q4 779 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nsmce2Q91VT1 247 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tm4sf4Q91XD3 202 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ly6kQ9CWP4 154 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cib4Q9D9N5 185 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Vps35Q9EQH3 796 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc13a2Q9ES88 586 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Cacna1dQ99246 2179 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gm17175E9Q528 179 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dpysl2O08553 572 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Pik3cdO35904 1043 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mllt10O54826 1068 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Gna12P27600 379 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 PfkmP47857 780 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc45a4Q0P5V9 785 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Lrrc74bQ14BP6 391 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Dok6Q2MHE5 331 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 McuQ3UMR5 350 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc39a4Q78IQ7 660 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr813Q7TRH5 310 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ugt2a1Q80X89 528 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 1700001J03RikQ80ZR8 219 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Sfr1Q8BP27 319 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rbm34Q8C5L7 375 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 RtknQ8C6B2 564 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Tmem246Q91YV9 403 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Trim8Q99PJ2 551 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 NplQ9DCJ9 320 aa10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 VapbQ9QY76 243 aaKnown RBP10.82□□□□□ -0.68
Msh3-201ENSMUST00000022220 Ascc3E9PZJ8 2198 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Il4i1O09046 630 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Resp18P47939 175 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Rab10P61027 200 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 1700061G19RikQ08EE8 705 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Colec11Q3SXB8 272 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Nol9Q3TZX8 714 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Svs1Q6WIZ7 820 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr26Q7TRB7 308 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Trim31Q8R0K2 507 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Evi2bQ8VD58 444 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Exd2Q8VEG4 650 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Slc22a7Q91WU2 540 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Krcc1Q99JT5 256 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Mrps17Q9CQE3 120 aaKnown RBP10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 NwcQ9CQI4 244 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 4930524N10RikQ9D519 233 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 HaghlQ9DB32 283 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Hmg20aQ9DC33 346 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Olfr933Q9EQA0 308 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 NckipsdQ9ESJ4 714 aa10.81□□□□□ -0.68
Msh3-201ENSMUST00000022220 Timp4Q9JHB3 224 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms