RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 WasP70315 520 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Alg6Q3TAE8 507 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Serac1Q3U213 654 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc13a5Q67BT3 572 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Zzz3Q6KAQ7 910 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Fndc11Q80WB0 326 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Arl5aQ80ZU0 179 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Fmo9Q8C116 539 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Batf2Q8R1H8 277 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc22a7Q91WU2 540 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Dio3Q91ZI8 304 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Frmd4bQ920B0 1035 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc5a2Q923I7 670 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc28a3Q9ERH8 703 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Slc2a5Q9WV38 501 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Dock3Q8CIQ7 2027 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Olfr625-ps1A0A140T8L4 321 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Odc1P00860 461 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Foxk1P42128 719 aaKnown RBP16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Ndst2P52850 883 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 CamkvQ3UHL1 512 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 B020004J07RikQ3UTC0 476 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Jak3Q62137 1100 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Tead4Q62296 427 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Tlr12Q6QNU9 906 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Gm7247Q6UY52 187 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Olfr667Q7TRP4 326 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Gtf2a2Q80ZM7 109 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Pxylp1Q8BHA9 480 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Trmt2bQ8BQJ6 493 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Phtf2Q8CB19 747 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Rdh13Q8CEE7 334 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 H2-Q4Q8HWB2 354 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Usp45Q8K387 813 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Mtg1Q8R2R6 326 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Rprd1aQ8VDS4 312 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Olfr617Q8VGA1 318 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Ca9Q8VHB5 437 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Pqbp1Q91VJ5 263 aaKnown RBP16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Ankrd61Q9CQM6 421 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Sugt1Q9CX34 336 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Vps35Q9EQH3 796 aaKnown RBP16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Plxna3P70208 1872 aa16.34■□□□□ 0.21
Shh-201ENSMUST00000002708 Zfp780bE9Q2S6 806 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Arfip1G5E8V9 373 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Ppef1O35655 650 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Tpst1O70281 370 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Polr2iP60898 125 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Naa20P61600 178 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 CtscP97821 462 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Zfp607aQ3TQG9 686 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Lmf1Q3U3R4 574 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Ppm1hQ3UYC0 513 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Cep295nlQ497N6 533 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Pi4k2bQ8CBQ5 469 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Bclaf1Q8K019 919 aaKnown RBP16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Pinx1Q9CZX5 332 aaKnown RBP16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Cldn19Q9ET38 224 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Epm2aQ9WUA5 330 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Clcn5Q9WVD4 746 aa16.33■□□□□ 0.21
Shh-201ENSMUST00000002708 Pate3B3GLJ3 98 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm7073E9QAS1 335 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Sult2b1O35400 338 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Stam2O88811 523 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Flot2Q60634 428 aaKnown RBP16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Cyp4b1Q64462 511 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Lrrc8eQ66JT1 795 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 BfarQ8R079 450 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Cmtm6Q9CZ69 183 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Pak1ip1Q9DCE5 382 aaKnown RBP16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Gipc1Q9Z0G0 333 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Plxna4Q80UG2 1893 aa16.33■□□□□ 0.2
Shh-201ENSMUST00000002708 Gm21964A0A1W2P7S4 437 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Veph1A1A535 833 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 PrkczQ02956 592 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Cd300lgQ1ERP8 331 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Arhgap30Q640N3 1101 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 RadilQ69Z89 1099 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Casc4Q6P2L7 435 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Clec7aQ6QLQ4 244 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Amz1Q8BVF9 502 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Tprg1Q8CB49 279 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Pnpla8Q8K1N1 776 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Gin1Q8K259 518 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Fbxo32Q9CPU7 355 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 S100pbpQ9D5K4 396 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 NckipsdQ9ESJ4 714 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Olfr675A0A1B0GSE1 317 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Kcng1A2BDX4 514 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Eif2b3B1AUN2 452 aaKnown RBP16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Slc9a3G3X939 829 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 ClockO08785 855 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Ldb2O55203 373 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Clec2lP0C7M9 211 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Hcrtr1P58307 416 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Rbp1Q00915 135 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Trmt10cQ3UFY8 414 aaKnown RBP16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Pacs2Q3V3Q7 862 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 GancQ8BVW0 898 aa16.32■□□□□ 0.2
Shh-201ENSMUST00000002708 Psapl1Q8C1C1 522 aa16.32■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms