RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 MSI1O43347 362 aaKnown RBP18.41■□□□□ 0.54
SCARB2-213ENST00000638680 ITPKAP23677 461 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 CERS5Q8N5B7 392 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 SUSD6Q92537 303 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 APOLD1Q96LR9 279 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 NXF3Q9H4D5 531 aaKnown RBP18.41■□□□□ 0.54
SCARB2-213ENST00000638680 FAM25EA8MYX2 175 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 CILPO75339 1184 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 NCK1P16333 377 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 ADRA1BP35368 520 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 LDB1Q86U70 411 aaPredicted RBP18.41■□□□□ 0.54
SCARB2-213ENST00000638680 SPACA7Q96KW9 195 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 FAM240BA0A1B0GVZ2 78 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 LYPLA2O95372 231 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 CST3P01034 146 aaPredicted RBP18.41■□□□□ 0.54
SCARB2-213ENST00000638680 IFNA16P05015 189 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 HNMTP50135 292 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 BSNDQ8WZ55 320 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 SGK2Q9HBY8 427 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 PTTG2Q9NZH5 202 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 PLK4O00444 970 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 FPGTO14772 594 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 AP2A1O95782 977 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 CBX3Q13185 183 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 RAPSNQ13702 412 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 VGLL4Q14135 290 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 ADGRE1Q14246 886 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 KLHL23Q8NBE8 558 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 SLC4A11Q8NBS3 891 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 LEMD2Q8NC56 503 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 HSD3B7Q9H2F3 369 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 COQ10BQ9H8M1 238 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 IFT80Q9P2H3 777 aaPredicted RBP18.41■□□□□ 0.54
SCARB2-213ENST00000638680 RCOR3Q9P2K3 495 aaPredicted RBP18.41■□□□□ 0.54
SCARB2-213ENST00000638680 DPP7Q9UHL4 492 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 POMPQ9Y244 141 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 PREX1Q8TCU6 1659 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 SKP1P63208 163 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 MADCAM1Q13477 382 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 FBXO48Q5FWF7 155 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 PIK3R6Q5UE93 754 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 AGMOQ6ZNB7 445 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 P2RY8Q86VZ1 359 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 CYP4X1Q8N118 509 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 MFSD3Q96ES6 412 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 PHF12Q96QT6 1004 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 COPS8Q99627 209 aa18.41■□□□□ 0.54
SCARB2-213ENST00000638680 ARHGEF33A8MVX0 844 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 QSOX1O00391 747 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 DHFRP00374 187 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 S100A1P23297 94 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 FOXN2P32314 431 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 MANFP55145 182 aaKnown RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 FSTL4Q6MZW2 842 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 GPR65Q8IYL9 337 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 INTS7Q9NVH2 962 aaKnown RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 IRGMA1A4Y4 181 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 HDCP19113 662 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 SLC5A3P53794 718 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 ACSBG2Q5FVE4 666 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 DIRAS2Q96HU8 199 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 NKIRAS2Q9NYR9 191 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 DDNO94850 711 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 HOXC6P09630 235 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 ICAM3P32942 547 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 MYBPC1Q00872 1141 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 PPP1R15BQ5SWA1 713 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CCNYL2Q5T2Q4 361 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 FAM98AQ8NCA5 519 aaKnown RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 SAGE2PA6NJ88 616 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 GPIP06744 558 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 ARF4P18085 180 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CES1P23141 567 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 PCBP1Q15365 356 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 IL23RQ5VWK5 629 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 C15orf52Q6ZUT6 534 aaKnown RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 OR4K2Q8NGD2 314 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 C10orf82Q8WW14 230 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CLIP3Q96DZ5 547 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CCDC59Q9P031 241 aaKnown RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CCNE2O96020 404 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 SDC2P34741 201 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 AKR1D1P51857 326 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 ADAM17P78536 824 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 RPTNQ6XPR3 784 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CFAP52Q8N1V2 620 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 HJURPQ8NCD3 748 aaPredicted RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 OR6K2Q8NGY2 324 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 SP140LQ9H930 580 aa18.4■□□□□ 0.54
SCARB2-213ENST00000638680 CNOT6Q9ULM6 557 aaKnown RBP18.4■□□□□ 0.54
SCARB2-213ENST00000638680 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.54
SCARB2-213ENST00000638680 GRIN2DO15399 1336 aa18.39■□□□□ 0.54
SCARB2-213ENST00000638680 TRAV19A0A0A6YYK7 116 aa18.39■□□□□ 0.53
SCARB2-213ENST00000638680 TNFRSF11BO00300 401 aa18.39■□□□□ 0.53
SCARB2-213ENST00000638680 GCATO75600 419 aa18.39■□□□□ 0.53
SCARB2-213ENST00000638680 CLCQ05315 142 aa18.39■□□□□ 0.53
SCARB2-213ENST00000638680 OLFML2AQ68BL7 652 aa18.39■□□□□ 0.53
SCARB2-213ENST00000638680 NEK5Q6P3R8 708 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms