RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 GPR22Q99680 433 aa16.57■□□□□ 0.24
SCARB2-210ENST00000638567 IPPKQ9H8X2 491 aa16.57■□□□□ 0.24
SCARB2-210ENST00000638567 RAI2Q9Y5P3 530 aa16.57■□□□□ 0.24
SCARB2-210ENST00000638567 KPNA3O00505 521 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 NRP1O14786 923 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 HLA-DQB2P05538 268 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 PBX3P40426 434 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 HERC3Q15034 1050 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 FAM110CQ1W6H9 321 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 GALNT5Q7Z7M9 940 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 LEMD2Q8NC56 503 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 STARD8Q92502 1023 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 COPS8Q99627 209 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 OSBPL6Q9BZF3 934 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 TXNRD2Q9NNW7 524 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 AHSPQ9NZD4 102 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 SELENONQ9NZV5 590 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 EIF2B4Q9UI10 523 aaKnown RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 KLHL20Q9Y2M5 609 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 DGKBQ9Y6T7 804 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 NUP98P52948 1817 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 PDLIM1O00151 329 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 IRAK2O43187 625 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CDH3P22223 829 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CYP4F2P78329 520 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CYP4F3Q08477 520 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 POC5Q8NA72 575 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 ATP13A3Q9H7F0 1226 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 NFKBIEO00221 500 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 MATN2O00339 956 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CAPN1P07384 714 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 IMPDH2P12268 514 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 HSPA7P48741 367 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CDH15P55291 814 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 RPS7P62081 194 aaKnown RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CRTC3Q6UUV7 619 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CPNE9Q8IYJ1 553 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 AHI1Q8N157 1196 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 APOLD1Q96LR9 279 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 C8orf4Q9NR00 106 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 ENOPH1Q9UHY7 261 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 EI24O14681 340 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 LINGO3P0C6S8 592 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 GMPRP36959 345 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 POLR2LP62875 67 aaKnown RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 RBM20Q5T481 1227 aaKnown RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 LINGO4Q6UY18 593 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 RPS27LQ71UM5 84 aaKnown RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 YME1L1Q96TA2 773 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 CHID1Q9BWS9 393 aa16.56■□□□□ 0.24
SCARB2-210ENST00000638567 ZNF490Q9ULM2 529 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 PHRF1Q9P1Y6 1649 aaKnown RBP16.56■□□□□ 0.24
SCARB2-210ENST00000638567 EFCAB10A6NFE3 127 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 ACOX1Q15067 660 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 PLEKHG4Q58EX7 1191 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 DGKKQ5KSL6 1271 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 ITCHQ96J02 903 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 B3GALT6Q96L58 329 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 NPY6RQ99463 290 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 CCDC106Q9BWC9 280 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 RASSF1Q9NS23 344 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 SLC25A14O95258 325 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 FTH1P02794 183 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 UROSP10746 265 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 MTHFD1P11586 935 aaKnown RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 CKBP12277 381 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 TACR2P21452 398 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 AQP1P29972 269 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 PITX1P78337 314 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 PAFAH1B3Q15102 231 aaKnown RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 TRAPPC5Q8IUR0 188 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 ZNF614Q8N883 585 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 LRTM1Q9HBL6 345 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 CAB39Q9Y376 341 aaPredicted RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 C9IYK1 514 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 CLDN11O75508 207 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 T-ENOLP0DO92 83 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 RXRGP48443 463 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 RPS6KA3P51812 740 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 GJA9P57773 515 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 NOL9Q5SY16 702 aaKnown RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 INTS11Q5TA45 600 aaKnown RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 NELL1Q92832 810 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 ABHD8Q96I13 439 aa16.55■□□□□ 0.24
SCARB2-210ENST00000638567 TDRKHQ9Y2W6 561 aaKnown RBP16.55■□□□□ 0.24
SCARB2-210ENST00000638567 C1RP00736 705 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 OR1D2P34982 312 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 SNRPD1P62314 119 aaKnown RBP16.54■□□□□ 0.24
SCARB2-210ENST00000638567 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-210ENST00000638567 TIMM50Q3ZCQ8 353 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 XKR6Q5GH73 641 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 UTS2BQ765I0 119 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 SLCO6A1Q86UG4 719 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 OSTM1Q86WC4 334 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 OR13C4Q8NGS5 318 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 SPPL2BQ8TCT7 592 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 PROX1Q92786 737 aa16.54■□□□□ 0.24
SCARB2-210ENST00000638567 MOCOSQ96EN8 888 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms