RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 PAK5Q9P286 719 aa16.9■□□□□ 0.3
LIN28B-202ENST00000635857 TMEM98Q9Y2Y6 226 aa16.9■□□□□ 0.3
LIN28B-202ENST00000635857 SCN8AQ9UQD0 1980 aa16.89■□□□□ 0.3
LIN28B-202ENST00000635857 GLYATL1P3A0A0U1RQE8 302 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 FADS2P1A8MWK0 482 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 B4DGG1 531 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 AURKAO14965 403 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 USP12O75317 370 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 ATP1A1P05023 1023 aaKnown RBP16.89■□□□□ 0.29
LIN28B-202ENST00000635857 SPINK2P20155 84 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 LPOP22079 712 aaPredicted RBP16.89■□□□□ 0.29
LIN28B-202ENST00000635857 ADRA1AP35348 466 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 POLD2P49005 469 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 GTF2H3Q13889 308 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 LRP8Q14114 963 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 SPARCL1Q14515 664 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 TAF1AQ15573 450 aaPredicted RBP16.89■□□□□ 0.29
LIN28B-202ENST00000635857 DRICH1Q6PGQ1 229 aaPredicted RBP16.89■□□□□ 0.29
LIN28B-202ENST00000635857 PPP1R21Q6ZMI0 780 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 TTC30BQ8N4P2 665 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 PDCD7Q8N8D1 485 aaKnown RBP16.89■□□□□ 0.29
LIN28B-202ENST00000635857 DNAAF3Q8N9W5 541 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 OR6C4Q8NGE1 309 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 GLYATL1Q969I3 302 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 EID2BQ96D98 161 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 TTC25Q96NG3 672 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 WDR24Q96S15 920 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 ZCCHC2Q9C0B9 1178 aaKnown RBP16.89■□□□□ 0.29
LIN28B-202ENST00000635857 IL17CQ9P0M4 197 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 ZNHIT2Q9UHR6 403 aa16.89■□□□□ 0.29
LIN28B-202ENST00000635857 GOLGA6L10A0A0M3HER8 536 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 GPR89AB7ZAQ6 455 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 PGRMC1O00264 195 aaKnown RBP16.88■□□□□ 0.29
LIN28B-202ENST00000635857 DKK1O94907 266 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 METTL18O95568 372 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 AP2A1O95782 977 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 GPR89BP0CG08 455 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 ACTR1BP42025 376 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 ACTR1AP61163 376 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 FAM151BQ6UXP7 276 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 NYAP1Q6ZVC0 841 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 EFL1Q7Z2Z2 1120 aaKnown RBP16.88■□□□□ 0.29
LIN28B-202ENST00000635857 TMPRSS12Q86WS5 348 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 SLC35F3Q8IY50 421 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 MAPK15Q8TD08 544 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 BRSK1Q8TDC3 778 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 VPS35Q96QK1 796 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 APPL1Q9UKG1 709 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 KLK13Q9UKR3 277 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 PADI4Q9UM07 663 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 DRG1Q9Y295 367 aaKnown RBP16.88■□□□□ 0.29
LIN28B-202ENST00000635857 MSRB2Q9Y3D2 182 aa16.88■□□□□ 0.29
LIN28B-202ENST00000635857 ARID1BQ8NFD5 2236 aaPredicted RBP16.87■□□□□ 0.29
LIN28B-202ENST00000635857 EME2A4GXA9 379 aaPredicted RBP16.87■□□□□ 0.29
LIN28B-202ENST00000635857 BUD23O43709 281 aaKnown RBP16.87■□□□□ 0.29
LIN28B-202ENST00000635857 TOP3BO95985 862 aaKnown RBP16.87■□□□□ 0.29
LIN28B-202ENST00000635857 MYF5P13349 255 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 JUPP14923 745 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 ADCY8P40145 1251 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 HADHAP40939 763 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 CTBSQ01459 385 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 OLIG2Q13516 323 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 SEPT6Q14141 434 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 HES3Q5TGS1 186 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 KCTD16Q68DU8 428 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 SLC30A9Q6PML9 568 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 TMPRSS7Q7RTY8 843 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 KYQ8NBH2 561 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 GPBAR1Q8TDU6 330 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 ZDHHC1Q8WTX9 485 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 OR2AG1Q9H205 316 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 SYNDIG1Q9H7V2 258 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 ARNT2Q9HBZ2 717 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 TRIM39Q9HCM9 518 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 RAB6BQ9NRW1 208 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 ARL5AQ9Y689 179 aa16.87■□□□□ 0.29
LIN28B-202ENST00000635857 ZW10O43264 779 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 VEGFDO43915 354 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 BASP1P80723 227 aaKnown RBP16.86■□□□□ 0.29
LIN28B-202ENST00000635857 CDH17Q12864 832 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 LAMB3Q13751 1172 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 SIX1Q15475 284 aaPredicted RBP16.86■□□□□ 0.29
LIN28B-202ENST00000635857 SMAD1Q15797 465 aaKnown RBP16.86■□□□□ 0.29
LIN28B-202ENST00000635857 PYCR3Q53H96 274 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 LDLRAP1Q5SW96 308 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 KCTD11Q693B1 232 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 GUSBP11Q6P575 273 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 CHST15Q7LFX5 561 aaPredicted RBP16.86■□□□□ 0.29
LIN28B-202ENST00000635857 KLHDC8BQ8IXV7 354 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 OR4K2Q8NGD2 314 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 CCL4L1Q8NHW4 92 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 WDR48Q8TAF3 677 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 DTX3LQ8TDB6 740 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 SCARF2Q96GP6 870 aaPredicted RBP16.86■□□□□ 0.29
LIN28B-202ENST00000635857 OSBPL9Q96SU4 736 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 ETNK1Q9HBU6 452 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 IL26Q9NPH9 171 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 TAAR2Q9P1P5 351 aa16.86■□□□□ 0.29
LIN28B-202ENST00000635857 CNOT6Q9ULM6 557 aaKnown RBP16.86■□□□□ 0.29
LIN28B-202ENST00000635857 OAS3Q9Y6K5 1087 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms