RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 OAS3Q9Y6K5 1087 aaKnown RBP17.84■□□□□ 0.45
SCAMP4-213ENST00000621748 PTPRQQ9UMZ3 2332 aa17.84■□□□□ 0.45
SCAMP4-213ENST00000621748 CACNA1GO43497 2377 aa17.83■□□□□ 0.45
SCAMP4-213ENST00000621748 LOC400499M0QZD8 3231 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 RGSL1A5PLK6 1076 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 PMPCBO75439 489 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 ATP1A1P05023 1023 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 PNLIPP16233 465 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 MAZP56270 477 aaKnown RBP17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 SLC14A2Q15849 920 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 PEX26Q7Z412 305 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 CCNJLQ8IV13 435 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 LSMEM2Q8N112 164 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 UBL4BQ8N7F7 174 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 TRIM58Q8NG06 486 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 PATE1Q8WXA2 126 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 ZNF578Q96N58 590 aaPredicted RBP17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 OR2M4Q96R27 311 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 HERPUD2Q9BSE4 406 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 ZFYVE1Q9HBF4 777 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 MAGEE1Q9HCI5 957 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 ASCL3Q9NQ33 180 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 TRIM10Q9UDY6 481 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 PCDHA3Q9Y5H8 950 aa17.83■□□□□ 0.44
SCAMP4-213ENST00000621748 D6RAR5 112 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 NUDT21O43809 227 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 ASMTLO95671 621 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 ECEL1O95672 775 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 CTNNA1P35221 906 aaKnown RBP17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 PPP2R5EQ16537 467 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 BBS12Q6ZW61 710 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 TMC3Q7Z5M5 1100 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 SPRED1Q7Z699 444 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 PDZD3Q86UT5 571 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 NAGSQ8N159 534 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 ZNF567Q8N184 647 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 GPR26Q8NDV2 337 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 SLC46A1Q96NT5 459 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 FOXP3Q9BZS1 431 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 CDH19Q9H159 772 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 C10orf88Q9H8K7 445 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 ATXN7L1Q9ULK2 861 aaPredicted RBP17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 PYCARDQ9ULZ3 195 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 ZNF711Q9Y462 761 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 PRKAB1Q9Y478 270 aa17.82■□□□□ 0.44
SCAMP4-213ENST00000621748 RRP8O43159 456 aaKnown RBP17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 MTSS1O43312 755 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 B4GAT1O43505 415 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 DNAJC6O75061 913 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 NDST3O95803 873 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 NFKB1P19838 968 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 ACTR1BP42025 376 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 ABCG1P45844 678 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 ERVPABLB-1P60509 514 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 ACTR1AP61163 376 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 B4GALNT1Q00973 533 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 IGF2-ASQ6U949 168 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 KDELC1Q6UW63 502 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 LRRC69Q6ZNQ3 347 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 GALNT13Q8IUC8 556 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 ARL14Q8N4G2 192 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 HTR3CQ8WXA8 447 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 QKIQ96PU8 341 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 VPS18Q9P253 973 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 KLHL8Q9P2G9 620 aaPredicted RBP17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 FAM153AQ9UHL3 310 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 PCDHGA8Q9Y5G5 932 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 SPO11Q9Y5K1 396 aa17.81■□□□□ 0.44
SCAMP4-213ENST00000621748 CCDC187A0A096LP49 1063 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 LOC285095A0A1B0GVY8 99 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 MIF4GDA9UHW6 222 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 F5H423 210 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 APOC4-APOC2K7ER74 178 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 AURKAO14965 403 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 APOC2P02655 101 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 SLC4A1P02730 911 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 WNT3AP56704 352 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 ALS2CLQ60I27 953 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 CCDC70Q6NSX1 233 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 FOXR1Q6PIV2 292 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 PID1Q7Z2X4 250 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 TMPRSS9Q7Z410 1059 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 ZNF438Q7Z4V0 828 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 LRRC57Q8N9N7 239 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 WDR36Q8NI36 951 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 LIN37Q96GY3 246 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 OXNAD1Q96HP4 312 aaPredicted RBP17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 NAF1Q96HR8 494 aaKnown RBP17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 GPR63Q9BZJ6 419 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 ZNHIT2Q9UHR6 403 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 SCN8AQ9UQD0 1980 aa17.8■□□□□ 0.44
SCAMP4-213ENST00000621748 BPTFQ12830 3046 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 A0A0U1RQJ8 604 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 CCDC66A2RUB6 948 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 GRID2IPA4D2P6 1211 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 RHPN2P1A8MT19 583 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 HACD1B0YJ81 288 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 BPIP17213 487 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 CTNNA2P26232 953 aa17.79■□□□□ 0.44
SCAMP4-213ENST00000621748 RBL1P28749 1068 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms