RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZNF487B1APH4 448 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 PPM1DO15297 605 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 TNFSF14O43557 240 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 CEP104O60308 925 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 NOBOXO60393 691 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 SNX2O60749 519 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 DKK1O94907 266 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 ECEL1O95672 775 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 ADCY8P40145 1251 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 NR2C2P49116 596 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 PGGT1BP53609 377 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 GSDMDP57764 484 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 CFHR1Q03591 330 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 RANBP10Q6VN20 620 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 TMC3Q7Z5M5 1100 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 RABEPKQ7Z6M1 372 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 TAF8Q7Z7C8 310 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 AGGF1Q8N302 714 aaeCLIP5.66□□□□□ -1.5
CPNE3-208ENST00000614678 BBS5Q8N3I7 341 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 SDR16C5Q8N3Y7 309 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 PRELID2Q8N945 189 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 OR4K2Q8NGD2 314 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 IFI44Q8TCB0 444 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 IFT43Q96FT9 208 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 WDR92Q96MX6 357 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 FCRL5Q96RD9 977 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 GPR63Q9BZJ6 419 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 GBA3Q9H227 469 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 FAM153AQ9UHL3 310 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 ZNHIT2Q9UHR6 403 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 WDR37Q9Y2I8 494 aa5.66□□□□□ -1.5
CPNE3-208ENST00000614678 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.66□□□□□ -1.5
CPNE3-208ENST00000614678 TRABD2BA6NFA1 517 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 OR52A4PA6NMU1 304 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 GOLGA8KD6RF30 607 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 GOLGA8TH3BQL2 631 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 BANF1O75531 89 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 CAPNS1P04632 268 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 PTMAP06454 111 aaKnown RBP5.65□□□□□ -1.5
CPNE3-208ENST00000614678 ZNF883P0CG24 379 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 HOXB3P14651 431 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-208ENST00000614678 DAB2P98082 770 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 B4GALNT1Q00973 533 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 ANKRD22Q5VYY1 191 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 KCTD11Q693B1 232 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 FOXR1Q6PIV2 292 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 FAM83HQ6ZRV2 1179 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-208ENST00000614678 ZNF438Q7Z4V0 828 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 SPOCK2Q92563 424 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 FRMD8Q9BZ67 464 aaPredicted RBP5.65□□□□□ -1.5
CPNE3-208ENST00000614678 SLC13A1Q9BZW2 595 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 FAM83DQ9H4H8 585 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 CIDEBQ9UHD4 219 aa5.65□□□□□ -1.5
CPNE3-208ENST00000614678 PDE2AO00408 941 aaPredicted RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 KRT86O43790 486 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 TJP3O95049 919 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 NDST3O95803 873 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 MYCLP1P12525 358 aaPredicted RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 HSPA9P38646 679 aaKnown RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 OR1D5P58170 312 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 HNRNPKP61978 463 aaKnown RBP eCLIP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PPP1CAP62136 330 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PEX6Q13608 980 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 GRM3Q14832 879 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 AGERQ15109 404 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 RPS6KA1Q15418 735 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 DUS1LQ6P1R4 473 aaKnown RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 EFL1Q7Z2Z2 1120 aaKnown RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 ADGRG6Q86SQ4 1221 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PIANPQ8IYJ0 282 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 MPP5Q8N3R9 675 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 CLDN19Q8N6F1 224 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 HCAR2Q8TDS4 363 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 ADAMTS14Q8WXS8 1223 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 CCDC74AQ96AQ1 378 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 SGF29Q96ES7 293 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 COX14Q96I36 57 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 DNAJC1Q96KC8 554 aaKnown RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PKNOX2Q96KN3 472 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 CAPZA3Q96KX2 299 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 SPATA13Q96N96 652 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PSMD13Q9UNM6 376 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 RNF215Q9Y6U7 377 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 CTSEP14091 401 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 BRAFP15056 766 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 ZFXP17010 805 aaPredicted RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 CKMT2P17540 419 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PBLDP30039 288 aaPredicted RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 RPL22P35268 128 aaKnown RBP5.65□□□□□ -1.51
CPNE3-208ENST00000614678 AMZ1Q400G9 498 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 PYCR3Q53H96 274 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 GLT6D1Q7Z4J2 308 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 VSIG1Q86XK7 387 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 LRRC49Q8IUZ0 686 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 ATXN7L3BQ96GX2 97 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 LYSMD1Q96S90 227 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 NUDT22Q9BRQ3 303 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 IL17CQ9P0M4 197 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 TAAR2Q9P1P5 351 aa5.65□□□□□ -1.51
CPNE3-208ENST00000614678 GPR34Q9UPC5 381 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms