RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ERAP2Q6P179 960 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 AFTPHQ6ULP2 937 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CRTC1Q6UUV9 634 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 KIAA0408Q6ZU52 694 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 ERN2Q76MJ5 926 aaKnown RBP11.4□□□□□ -0.58
SLIRP-212ENST00000613856 SYT13Q7L8C5 426 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 GALNT7Q86SF2 657 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 MMAAQ8IVH4 418 aaKnown RBP11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CBARPQ8N350 705 aaPredicted RBP11.4□□□□□ -0.58
SLIRP-212ENST00000613856 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PPM1NQ8N819 430 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 OR4K2Q8NGD2 314 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 OR13C4Q8NGS5 318 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 OR2I1PQ8NGU4 316 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CALML6Q8TD86 181 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 DCAKDQ8WVC6 231 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 RLN3Q8WXF3 142 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PIGKQ92643 395 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 EID2BQ96D98 161 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 CDKN2AIPNLQ96HQ2 116 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 TMBIM4Q9HC24 238 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 DYRK4Q9NR20 520 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 GGT7Q9UJ14 662 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 SCML1Q9UN30 329 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PKP3Q9Y446 797 aa11.4□□□□□ -0.58
SLIRP-212ENST00000613856 PLXND1Q9Y4D7 1925 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CCDC162PA2VCL2 907 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 POC1B-GALNT4F8VUJ3 575 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 AREL1O15033 823 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 KHNYNO15037 678 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 SPINT1O43278 529 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 AP1G1O43747 822 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 ATG13O75143 517 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CLDN7O95471 211 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 SYF2O95926 243 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 INHBAP08476 426 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 ADRB3P13945 408 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 OGNP20774 298 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CNTFP26441 200 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 DRD3P35462 400 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 GP5P40197 560 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 PTGER3P43115 390 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 MSH2P43246 934 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 DHPSP49366 369 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 SERPINB9P50453 376 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 METAP1P53582 386 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CSE1LP55060 971 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 DCDC1P59894 354 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 RPS14P62263 151 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 ZBTB16Q05516 673 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 ILF2Q12905 390 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 RALGDSQ12967 914 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 THOC5Q13769 683 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 ARHGEF7Q14155 803 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 PTPRRQ15256 657 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 HSP90AA5PQ58FG0 334 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 ZDHHC20Q5W0Z9 365 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 NEPROQ6NW34 567 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CYP2U1Q7Z449 544 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 MTERF4Q7Z6M4 381 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 TTC7BQ86TV6 843 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 TSPAN33Q86UF1 283 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CTAGE3PQ8IX95 158 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CHCHD4Q8N4Q1 142 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 GPR150Q8NGU9 434 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 DTX3LQ8TDB6 740 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 HDAC10Q969S8 669 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 TBATAQ96M53 351 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 CPNE1Q99829 537 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 MCMBPQ9BTE3 642 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 STMN4Q9H169 189 aaPredicted RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 PPANQ9NQ55 473 aaKnown RBP11.39□□□□□ -0.59
SLIRP-212ENST00000613856 RAD18Q9NS91 495 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 FAM53CQ9NYF3 392 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 IL1RAPL1Q9NZN1 696 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 EBF1Q9UH73 591 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 MSRB2Q9Y3D2 182 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 NEUROG3Q9Y4Z2 214 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 IKBKGQ9Y6K9 419 aa11.39□□□□□ -0.59
SLIRP-212ENST00000613856 PTPRBP23467 1997 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 IGSF10Q6WRI0 2623 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 RGSL1A5PLK6 1076 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 SMIM23A6NLE4 172 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 GOLGA8KD6RF30 607 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 MID1O15344 667 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 RGS16O15492 202 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-212ENST00000613856 BUD23O43709 281 aaKnown RBP11.38□□□□□ -0.59
SLIRP-212ENST00000613856 GOT2P00505 430 aaKnown RBP11.38□□□□□ -0.59
SLIRP-212ENST00000613856 SLC4A1P02730 911 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 C1SP09871 688 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 ATP5DP30049 168 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 FOXN2P32314 431 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 SPAM1P38567 509 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 P2RY2P41231 377 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 SLC1A2P43004 574 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 SLCO1A2P46721 670 aa11.38□□□□□ -0.59
SLIRP-212ENST00000613856 SIM1P81133 766 aaPredicted RBP11.38□□□□□ -0.59
SLIRP-212ENST00000613856 XIAPP98170 497 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms