RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 CDK14O94921 469 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 OXSR1O95747 527 aaPredicted RBP10.81□□□□□ -0.68
FAM3A-221ENST00000612856 PIK3CGP48736 1102 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 CDH13P55290 713 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 ERVK-21P61565 698 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 RELAQ04206 551 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 MPPE1Q53F39 396 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 DNAJC14Q6Y2X3 702 aaPredicted RBP10.81□□□□□ -0.68
FAM3A-221ENST00000612856 USP45Q70EL2 814 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 C11orf74Q86VG3 221 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 KBTBD7Q8WVZ9 684 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 TOP1MTQ969P6 601 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF670Q9BS34 389 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 PRKAB1Q9Y478 270 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 ANKRD12Q6UB98 2062 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 FGF10O15520 208 aaPredicted RBP10.81□□□□□ -0.68
FAM3A-221ENST00000612856 RPL10P27635 214 aaKnown RBP10.81□□□□□ -0.68
FAM3A-221ENST00000612856 CD151P48509 253 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 NR2C2P49116 596 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 CAP1Q01518 475 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 INAQ16352 499 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 TMEM31Q5JXX7 168 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 TTC39BQ5VTQ0 682 aaPredicted RBP10.81□□□□□ -0.68
FAM3A-221ENST00000612856 AAGABQ6PD74 315 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 COLGALT2Q8IYK4 626 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 PARP8Q8N3A8 854 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF614Q8N883 585 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 ELMO1Q92556 727 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 RELTQ969Z4 430 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 FUBP3Q96I24 572 aaKnown RBP eCLIP10.81□□□□□ -0.68
FAM3A-221ENST00000612856 CIB1Q99828 191 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 FOXP3Q9BZS1 431 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 MID2Q9UJV3 735 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 PCDHGC3Q9UN70 934 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 RAD54BQ9Y620 910 aa10.81□□□□□ -0.68
FAM3A-221ENST00000612856 K7EPI3 171 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 K7ERQ8 282 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 GNGT2O14610 69 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 TRIM24O15164 1050 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 MTA2O94776 668 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PCNAP12004 261 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 RAP1GDS1P52306 607 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PGGT1BP53609 377 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 POLR2LP62875 67 aaKnown RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 SEMA5AQ13591 1074 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 MBTPS1Q14703 1052 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 TEX44Q53QW1 395 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 BRMS1LQ5PSV4 323 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ADGRF1Q5T601 910 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 VITQ6UXI7 678 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 BNC2Q6ZN30 1099 aaPredicted RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PCDH20Q8N6Y1 951 aaKnown RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 BPIFB1Q8TDL5 484 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 SKA1Q96BD8 255 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 TRIM43Q96BQ3 446 aaPredicted RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 TUBGCP3Q96CW5 907 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 VPS50Q96JG6 964 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 SPACA7Q96KW9 195 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PRICKLE1Q96MT3 831 aaPredicted RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 OXCT2Q9BYC2 517 aaPredicted RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ALG9Q9H6U8 611 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ICE1Q9Y2F5 2266 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 FER1L6Q2WGJ9 1857 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ATP6AP2A0A1C7CYW4 349 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 GSTA4O15217 222 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 TYROBPO43914 113 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ATP6AP2O75787 350 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 SOX9P48436 509 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 HADHBP55084 474 aaKnown RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 CREMQ03060 361 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 CTC1Q2NKJ3 1217 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 TTLL9Q3SXZ7 439 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ARHGAP17Q68EM7 881 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 SLC41A1Q8IVJ1 513 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ZNF567Q8N184 647 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 DPEP2Q9H4A9 486 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 POLR1BQ9H9Y6 1135 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 GLOD4Q9HC38 313 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 FBXW11Q9UKB1 542 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PCDHGB4Q9UN71 923 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PCDHGB5Q9Y5G0 923 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 HS3ST4Q9Y661 456 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 CFAP20Q9Y6A4 193 aaKnown RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 IFRD1O00458 451 aaPredicted RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 FFAR3O14843 346 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ALOX15BO15296 676 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 GPR42O15529 346 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PIGNO95427 931 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 CFIP05156 583 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 SLC1A6P48664 564 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ALDH9A1P49189 494 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PTP4A2Q12974 167 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 CYP1B1Q16678 543 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 PDCD4Q53EL6 469 aaKnown RBP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 KLHDC9Q8NEP7 349 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 HHIPL1Q96JK4 782 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 ATAD3AQ9NVI7 634 aa10.8□□□□□ -0.68
FAM3A-221ENST00000612856 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.8□□□□□ -0.68
FAM3A-221ENST00000612856 DOCK1Q14185 1865 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms