RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	TUBB1	Q9H4B7	451 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	GOLGA2P5	Q9HBQ8	144 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	AIG1	Q9NVV5	245 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TMEM45A	Q9NWC5	275 aa		13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	GPC6	Q9Y625	555 aa	Predicted RBP	13.69	□□□□□ -0.22
UBE2F-223	ENST00000612130	TNS1	Q9HBL0	1735 aa	Known RBP	13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	ASPDH	A6ND91	283 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	GRXCR2	A6NFK2	248 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130		H3BRB1	525 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	ALPL	P05186	524 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	ENO2	P09104	434 aa	Predicted RBP	13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	PRR35	P0CG20	571 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	HRH2	P25021	359 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	FOXA1	P55317	472 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	WNT3A	P56704	352 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	KDELC1	Q6UW63	502 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	ZBTB46	Q86UZ6	589 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	SPART	Q8N0X7	666 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	SMG8	Q8ND04	991 aa	Known RBP	13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	OR13J1	Q8NGT2	312 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	RHEBL1	Q8TAI7	183 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	FKBP10	Q96AY3	582 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	BCL7B	Q9BQE9	202 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	CORO1B	Q9BR76	489 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	ATXN3L	Q9H3M9	355 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	POPDC3	Q9HBV1	291 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	ATP13A1	Q9HD20	1204 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	CRTAC1	Q9NQ79	661 aa		13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
UBE2F-223	ENST00000612130	UPK1A	O00322	258 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	B4GAT1	O43505	415 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	CYBB	P04839	570 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	UGT2B4	P06133	528 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	FDXR	P22570	491 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	BDNF	P23560	247 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SERPINH1	P50454	418 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	PYCR3	Q53H96	274 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	GJC2	Q5T442	439 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	KIAA0319	Q5VV43	1072 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	TTC23	Q5W5X9	447 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	WSCD1	Q658N2	575 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	PRR23B	Q6ZRT6	265 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	ITIH5	Q86UX2	942 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SPNS2	Q8IVW8	549 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	KIAA2013	Q8IYS2	634 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	TMEM199	Q8N511	208 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	PDZD8	Q8NEN9	1154 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	ZMIZ2	Q8NF64	920 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	S100Z	Q8WXG8	99 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	EDEM1	Q92611	657 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	MUL1	Q969V5	352 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	AURKB	Q96GD4	344 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	BTN2A3P	Q96KV6	586 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	NSMCE2	Q96MF7	247 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SEPHS2	Q99611	448 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	LRRC3	Q9BY71	257 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	TRIM8	Q9BZR9	551 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	BRINP2	Q9C0B6	783 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	CATSPERB	Q9H7T0	1116 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	NTN4	Q9HB63	628 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	AKIP1	Q9NQ31	210 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	RGS18	Q9NS28	235 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	KLK14	Q9P0G3	267 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	ENPP5	Q9UJA9	477 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	GIT1	Q9Y2X7	761 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	PTCH2	Q9Y6C5	1203 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	GJA3	Q9Y6H8	435 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	CCDC154	A6NI56	674 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	AQP9	O43315	295 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	BCAS1	O75363	584 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	USP2	O75604	605 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	RSL1D1	O76021	490 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	KCNH1	O95259	989 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	S1PR4	O95977	384 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	MT-ND1	P03886	318 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	ZFP36L2	P47974	494 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	APLP1	P51693	650 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	TRIM32	Q13049	653 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	LCP2	Q13094	533 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	TOP3A	Q13472	1001 aa	Predicted RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SPCS2	Q15005	226 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	TMEM214	Q6NUQ4	689 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SLC16A12	Q6ZSM3	486 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	FKBP9P1	Q75LS8	142 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	EFL1	Q7Z2Z2	1120 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	PIM3	Q86V86	326 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	LRRC49	Q8IUZ0	686 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SLC22A17	Q8WUG5	538 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	NUP205	Q92621	2012 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	EXT2	Q93063	718 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	RNF34	Q969K3	372 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	VMP1	Q96GC9	406 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	RNF145	Q96MT1	663 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	HEPH	Q9BQS7	1158 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	FUNDC2	Q9BWH2	189 aa		13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	NUSAP1	Q9BXS6	441 aa	Known RBP	13.67	□□□□□ -0.22
UBE2F-223	ENST00000612130	SLC39A8	Q9C0K1	460 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms