RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 PELI3Q8N2H9 469 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 MDM1Q8TC05 714 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 MAIP1Q8WWC4 291 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 ALG3Q92685 438 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 CCDC74AQ96AQ1 378 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 SPATA13Q96N96 652 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 TMEM74Q96NL1 305 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 SMIM14Q96QK8 99 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 CARD9Q9H257 536 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 TAAR2Q9P1P5 351 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 LRIT1Q9P2V4 623 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 NFKBIL1Q9UBC1 381 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 FEZ2Q9UHY8 353 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 PACSIN2Q9UNF0 486 aaPredicted RBP12.24□□□□□ -0.45
CBWD3-208ENST00000612050 TMEM98Q9Y2Y6 226 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 PLXNB3Q9ULL4 1909 aa12.24□□□□□ -0.45
CBWD3-208ENST00000612050 MYLKQ15746 1914 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 A0A0U1RQS6 177 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 GOLGA6L3A6NEY3 463 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 F5H423 210 aaPredicted RBP12.23□□□□□ -0.45
CBWD3-208ENST00000612050 STX7O15400 261 aaKnown RBP12.23□□□□□ -0.45
CBWD3-208ENST00000612050 VEGFDO43915 354 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 USP12O75317 370 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 CRTAMO95727 393 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 MSNP26038 577 aaKnown RBP12.23□□□□□ -0.45
CBWD3-208ENST00000612050 RBMS1P29558 406 aaKnown RBP12.23□□□□□ -0.45
CBWD3-208ENST00000612050 CD68P34810 354 aaPredicted RBP12.23□□□□□ -0.45
CBWD3-208ENST00000612050 SPAM1P38567 509 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 POLD2P49005 469 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 CTBSQ01459 385 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 IHHQ14623 411 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 OGFOD3Q6PK18 319 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 KDELC1Q6UW63 502 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 RFLNAQ6ZTI6 216 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 CHST15Q7LFX5 561 aaPredicted RBP12.23□□□□□ -0.45
CBWD3-208ENST00000612050 TRIM74Q86UV6 250 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 CCNJLQ8IV13 435 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 LRRC8AQ8IWT6 810 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 GPR156Q8NFN8 814 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 TRIM58Q8NG06 486 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 BRSK1Q8TDC3 778 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 GLYATL1Q969I3 302 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 HES6Q96HZ4 224 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 COX14Q96I36 57 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 FICDQ9BVA6 458 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 TRIM39Q9HCM9 518 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 LZTFL1Q9NQ48 299 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 CAPN6Q9Y6Q1 641 aa12.23□□□□□ -0.45
CBWD3-208ENST00000612050 LY6G6EA0A0G2JKS1 128 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 GRID2O43424 1007 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 SOD1P00441 154 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 ATP1A1P05023 1023 aaKnown RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 RPLP0P05388 317 aaKnown RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 PSMB4P28070 264 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 LMAN1P49257 510 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 CLDN6P56747 220 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 EIF3IQ13347 325 aaKnown RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 CAMK2BQ13554 666 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 RTP5Q14D33 572 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 INSCQ1MX18 579 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 ISXQ2M1V0 245 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 MAP9Q49MG5 647 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 PYCR3Q53H96 274 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 PERM1Q5SV97 790 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 CERCAMQ5T4B2 595 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 CDCP2Q5VXM1 449 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 GPR26Q8NDV2 337 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 SH3KBP1Q96B97 665 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 SCARF2Q96GP6 870 aaPredicted RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 AHCYL2Q96HN2 611 aaKnown RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 MRGPRX2Q96LB1 330 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 AGAP2Q99490 1192 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 LRRN3Q9H3W5 708 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 CAAP1Q9H8G2 361 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 BPIFA1Q9NP55 256 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 APPL1Q9UKG1 709 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 U3KQA8 63 aa12.22□□□□□ -0.45
CBWD3-208ENST00000612050 GOLGA4Q13439 2230 aaKnown RBP12.22□□□□□ -0.45
CBWD3-208ENST00000612050 GLYATL1P3A0A0U1RQE8 302 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 C5orf60A6NFR6 353 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 OR5K4A6NMS3 321 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 FADS2P1A8MWK0 482 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 E7EVH7 732 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 KMOO15229 486 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 DDX3YO15523 660 aaKnown RBP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 BPIP17213 487 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 LPOP22079 712 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 AK4P27144 223 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 HADHAP40939 763 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 GPR3P46089 330 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 GABREP78334 506 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 CLPPQ16740 277 aaPredicted RBP12.21□□□□□ -0.45
CBWD3-208ENST00000612050 PARP6Q2NL67 630 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 LDLRAP1Q5SW96 308 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 AADACL2Q6P093 401 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 ZNF662Q6ZS27 426 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 LRRTM4Q86VH4 590 aa12.21□□□□□ -0.45
CBWD3-208ENST00000612050 MARCH9Q86YJ5 346 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms